Query= MSMg01no059_a10.b1 MSMg01no059_a10.b1 CHROMAT_FILE:
MSMg01no059_a10.b1 PHD_FILE: MSMg01no059_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:25 2005
(648 letters)
>mm_chr8_106074000_106075048
Length = 1049
Score = 1208 bits (625), Expect = 0.0
Identities = 640/645 (99%), Gaps = 1/645 (0%)
Strand = Plus / Minus
Query: 5 gaattcatccaggaggacgggctcagggtgatgcgcttcccaccgatggatccctatacg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gaattcatccaggaggatgggctcagggtgatgcgcttcccaccgatggatccctatacg 790
Query: 65 gcttccctgctgac-ttacacgtttccttttttgcagctctgatttctcattcttccaga 123
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 789 gcttccctgctgacattacacgtttccttttctgcagctctgatttctcattcttccaga 730
Query: 124 cattgctgtgactctgtggggggaggcaggagggacttctccctttcctaagaagccggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cattgctgtgactctgtggggggaggcaggagggacttctccctttcctaagaagccggc 670
Query: 184 agcaacagggatttgttttccccactcatcatgactgtgcatgtgagcaagactggtaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 669 agcaacagggatttgttttccccactcatcatgactgtgcatgtgagcaagactggttac 610
Query: 244 ttgttgcccaccgtgcacggctgcacagccagatgttgctgaatctcaggtctcccagct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ttgttgcccaccgtgcacggctgcacagccagatgttgctgaatctcaggtctcccagct 550
Query: 304 ggctcagagcaggctgcaatcacagaggcaggagtggaacctcctgggcttgtgcttctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ggctcagagcaggctgcaatcacagaggcaggagtggaacctcctgggcttgtgcttctg 490
Query: 364 gaaagtcacctcattcaccagcccactgaagatgtccgttggggcatccagctaacttgc 423
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 489 gaaagtcacctcattcaccagcccactgaagatgtccgttggggcatccatctaacttgc 430
Query: 424 cattggtccctgagttggaggaaagttctacagattggaaggctgcctccaaaggacatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cattggtccctgagttggaggaaagttctacagattggaaggctgcctccaaaggacatt 370
Query: 484 ctctatggactttttctgcctctggttgctaatgcatggtgctctgaatgaatgatttcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctctatggactttttctgcctctggttgctaatgcatggtgctctgaatgaatgatttcc 310
Query: 544 ctgcttcatcaacgtttaatatttaggaaaaggaatatcttatttgtcttgctaaatgca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ctgcttcatcaacgtttaatatttaggaaaaggaatatcttatttgtcttgctaaatgca 250
Query: 604 aattgggaacccatccttggtctgatcacatggaaatttcctggc 648
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aattgggaacccatccttggtctgatcacatggaaatttcctggc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1049
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1039
Effective search space: 662882
Effective search space used: 662882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_a10.g1 MSMg01no059_a10.g1 CHROMAT_FILE:
MSMg01no059_a10.g1 PHD_FILE: MSMg01no059_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:26 2005
(388 letters)
>mm_chr8_105981197_105981984
Length = 788
Score = 717 bits (371), Expect = 0.0
Identities = 383/387 (98%)
Strand = Plus / Plus
Query: 1 gggaaaggaggagggggcttcacgcttccgatgtccatgacaaacagtctccttctaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggaaaggaggagggggcttcacgcttccgatgtccatgacaaacagtctccttctaata 260
Query: 61 gtctctgatcttggcaaggagaacacaaaggcctaagagaaatgagaagcttatccagtc 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gtctctgatcttggcaaggagaacacaaagggttaagagaaatgagaagcttatccagtc 320
Query: 121 ttgcatggtggtttttcagtaatcactaaagtctatcctttgaagatgttatgggtttaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcatggtggtttttcggtaatcactaaagtctatcctttgaagatgttatgggtttaa 380
Query: 181 ctctttacgagccaaacacaatgcccaattcatggccattgcctatcgcagaaacccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctttacgagccaaacacaatgcccaattcatggccattgcctatcgcagaaacccaag 440
Query: 241 aactttgtgctaaatagcatactctagagctcatcagcacggatgaacagaaccagagtc 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactctgtgctaaatagcatactctagagctcatcagcacggatgaacagaaccagagtc 500
Query: 301 ttaaggatattattagtaatgtgaatctggggtatcaactacaagcaaagcagacctcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaggatattattagtaatgtgaatctggggtatcaactacaagcaaagcagacctcgt 560
Query: 361 acaagagtgagagttcagaaatagcac 387
|||||||||||||||||||||||||||
Sbjct: 561 acaagagtgagagttcagaaatagcac 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
