Query= MSMg01no059_g02.b1 MSMg01no059_g02.b1 CHROMAT_FILE:
MSMg01no059_g02.b1 PHD_FILE: MSMg01no059_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:52 2005
(277 letters)
>mm_chr8_92407947_92408623
Length = 677
Score = 474 bits (245), Expect = e-138
Identities = 251/253 (99%), Gaps = 2/253 (0%)
Strand = Plus / Minus
Query: 4 gaattctctgaatcttc-gtttccatatataaagttgggaacaagaacctacctttcttt 62
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gaattctctgaatc-tcagtttccatatataaagttgggaacaagaacctacctttcttt 397
Query: 63 gagttattctaagagttcagttttagtacaaataatgcataaggctgaatagagcttgca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gagttattctaagagttcagttttagtacaaataatgcataaggctgaatagagcttgca 337
Query: 123 acatggctgactctcattgttctgtctatggttattgtttattactatggcaaccattat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acatggctgactctcattgttctgtctatggttattgtttattactatggcaaccattat 277
Query: 183 tttgacatctttatatctattatttcactaataagactatttcagactggtgagttggct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tttgacatctttatatctattatttcactaataagactatttcagactggtgagttggct 217
Query: 243 cgtgggggggggg 255
|||||||||||||
Sbjct: 216 cgtgggggggggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no059_g02.g1 MSMg01no059_g02.g1 CHROMAT_FILE:
MSMg01no059_g02.g1 PHD_FILE: MSMg01no059_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:52 2005
(569 letters)
>mm_chr8_92247797_92248765
Length = 969
Score = 1100 bits (569), Expect = 0.0
Identities = 569/569 (100%)
Strand = Plus / Plus
Query: 1 attatcgttattccacaattgaggaaacagtgcgtatactgaatttaaaaagaaacagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attatcgttattccacaattgaggaaacagtgcgtatactgaatttaaaaagaaacagag 260
Query: 61 ttatggccatcagctaataaatctcctgctgaatctagtgtgagtctgaagcctgtactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatggccatcagctaataaatctcctgctgaatctagtgtgagtctgaagcctgtactg 320
Query: 121 tatcctgtgctctgcctcccacatgaaaacagatgcatatggatttaaggaggagacacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcctgtgctctgcctcccacatgaaaacagatgcatatggatttaaggaggagacacg 380
Query: 181 gtgaagagtggtacatgctttcccacagtcccgtttgacccagggaatcaacctttgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgaagagtggtacatgctttcccacagtcccgtttgacccagggaatcaacctttgaac 440
Query: 241 ttcagagaataagtgtgggcaagtttcacttctaaagtcaaagcaagtgagggcatgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagagaataagtgtgggcaagtttcacttctaaagtcaaagcaagtgagggcatgaga 500
Query: 301 tgcctacctcaccaccaagcatcctctttaggtttacttagtgttatcttaagagagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcctacctcaccaccaagcatcctctttaggtttacttagtgttatcttaagagagact 560
Query: 361 cctggctctatggaacacaagcctagggaggagggatttgggggctctctagagggaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctggctctatggaacacaagcctagggaggagggatttgggggctctctagagggaaga 620
Query: 421 tggttaaagtagggctggaagagggtttagtggcttgttgtacagacttaagatgatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggttaaagtagggctggaagagggtttagtggcttgttgtacagacttaagatgatgaa 680
Query: 481 agatgcatcgctgagatcatgttcctgtggaccagacaaggcagagagcccaaggaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agatgcatcgctgagatcatgttcctgtggaccagacaaggcagagagcccaaggaaaga 740
Query: 541 ataaacccatcagatgctgtctgggtgct 569
|||||||||||||||||||||||||||||
Sbjct: 741 ataaacccatcagatgctgtctgggtgct 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
