NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCTTTGTTCCACCTGTATGTAGTGAAAAAGAATAGTCTGAAT
TACACTACTGGAACAGTAAGTTGGCTACTAGGTAAAGATGCTTATCAACA
AGCCTGGTGTCTCTCGAATTTGGTCTTCAGAGCCCCCATGGTACAAAAAG
ACAACTAACTTGTAAAAGCTGATTTCTGACCTTCACCTGTATGCTGTAAT
ATGTACAGTTGCATCTATGTGCATGTGTGCATATACATACATGCACACAC
ACACACACACACACACACACACACACACACACACTTAACTAAAAAAATGT
GAAAACAGCTATATTCTCGGTGCACCCCAATTGCAAAATAACAAATAAAT
AGATAGGTAAATCTATGAAAGTATTACATTCCTGGGTCAACCCAGTTATC
GGCTGCATAGGTATCAGAGTCAACCACCTGGCTGATGGGAAGAGAGTTAT
GTTATATAGAACAACTTTCCTCTGAGTGTCTTTCTAATTGCTGCCTAATT
TTGGTCCCATGAACACTCAACATAATCTAGGAAGAACTTGACCGACCATT
ATTTCTATCCACCTTATGAAGTACTTCTTTAGTAAGGTGACTCATTCATT
CTAGGATTATTTATTCATGTGTAGACTTCGTGAATAAATTGCCTCACTTA
CTGCTTTTGGTGTCC

AACGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAATGTGGACTCCAGAAAAT
CAAATAACCCCATTAAAAATGGGGCTCAGAGCTAAACAAAGAATTCTCAC
CCGAGGAATACCGAATGGCTGAGAAGTACCTAAAAAAATGTTCAACATCC
TTAATCATCAGGGAAATATGAATCAAAACAACCCTGAGATGCCACTTCAC
ACCAGTCAGAATGGCTAAGTTCAAAAACAGATGCTGGCAAGGATGTGGAG
AAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCA
CTCTGGAAATCAGTTTGGCGGTTCCTCAGAAAATTGGACATAGTACTACC
GGAGGATCCTGCAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAA
CCGGTAAGAAGGACACATGCTGTACTATGTTCATAGCAGCCTTATTTATA
ATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAGCAGAGGAATGGAT
CATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGGCAAATGGATTGACCTGGAGGGCATCATCCTACCTCAGTAC
AGGGGAACACCAGGGCCAAGAAGTGGGAGTGGGTGGTTGGGGGAGTCAAT
NCCAAACAGCAACTTTT

Query= MSMg01no059_k03.b1 MSMg01no059_k03.b1 CHROMAT_FILE:
MSMg01no059_k03.b1 PHD_FILE: MSMg01no059_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:11 2005
         (622 letters)



>mm_chr8_99159079_99160101
          Length = 1023

 Score =  975 bits (504), Expect = 0.0
 Identities = 576/624 (92%), Gaps = 42/624 (6%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctttgttcca----cctgtatgtagtgaa-aaagaatagtctgaattacacta 59
           ||||||||||||   ||    ||||||||||||||| |||||||||||||||||||||||
Sbjct: 236 gaattctctttg---caaatacctgtatgtagtgaacaaagaatagtctgaattacacta 292

                                                                       
Query: 60  ctggaacagtaagttggctactaggtaaagatgcttatcaacaagcctggtgtctctcga 119
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 293 ctggaacagtaagttggctactaggtaaagatgcttatcaacaagcttggtgtctttcga 352

                                                                       
Query: 120 atttggtcttcagagcccccatggtacaaaaagacaactaacttgtaaaagctgatttct 179
           ||||||||||||         ||||| |||||||||||||||||||||||||||||||||
Sbjct: 353 atttggtcttca---------tggtagaaaaagacaactaacttgtaaaagctgatttct 403

                                                                       
Query: 180 gaccttcacctgtatgctgtaatatgtacagttgcatctatgtgcatgtgtgcatataca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaccttcacctgtatgctgtaatatgtacagttgcatctatgtgcatgtgtgcatataca 463

                                                                       
Query: 240 tacatgcacacacacacacacacacacacacacacacacacacacacttaactaaaaaaa 299
           |||||||||||||||||||||||                        |||||||||||||
Sbjct: 464 tacatgcacacacacacacacac------------------------ttaactaaaaaaa 499

                                                                       
Query: 300 -tgtgaaaacagctatattctcggtgcaccccaattgcaaaataacaaataaatagatag 358
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atgtgaaaacagctatattctcggtgcaccccaattgcaaaataacaaataaatagatag 559

                                                                       
Query: 359 gtaaatctatgaaagtattacattcctgggtcaacccagttatcggctgcataggtatca 418
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 560 gtaaatctatgaaagtattacattcctgggtcaacccagttatcagctgcataggtatca 619

                                                                       
Query: 419 gagtcaaccacctggctgatgggaagagagttatgttatatagaacaactttcctctgag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 620 gagtcaaccacctggctgatgggaagagagttatgttatatagaacaactttcctctgac 679

                                                                       
Query: 479 tgtctttctaattgctgcctaattttggtcccatgaacactcaacataatctaggaagaa 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtctttctaattgctgcctaattttggtcccatgaacactcaacataatctaggaagaa 739

                                                                       
Query: 539 cttgaccgaccattatttctatccaccttatgaagtacttctttagtaaggtgactcatt 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttgaccgaccattatttctatccaccttatgaagtacttctttagtaaggtgactcatt 799

                                   
Query: 599 cattctaggattatttattcatgt 622
           |||||||| |||||||||||||||
Sbjct: 800 cattctagtattatttattcatgt 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1023
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1013
Effective search space:   619956
Effective search space used:   619956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)