Query= MSMg01no062_m16.b1 MSMg01no062_m16.b1 CHROMAT_FILE:
MSMg01no062_m16.b1 PHD_FILE: MSMg01no062_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:45 2005
(614 letters)
>mm_chr8_82363281_82364295
Length = 1015
Score = 1042 bits (539), Expect = 0.0
Identities = 596/615 (96%), Gaps = 1/615 (0%)
Strand = Plus / Minus
Query: 1 attattctgtgaggaactttttattattgcctcaacctccttactgcccctgagcttagt 60
||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||
Sbjct: 759 attattctgtgaggaactttttattattgattcaatctccttactgtttctgagcttagt 700
Query: 61 cagatattctgtttttatgacacagtctcagtaggttttctgatttctaagaatttgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cagatattctgtttttatgacacagtctcagtaggttttctgatttctaagaatttgtct 640
Query: 121 gtttcatctggattatcttatctgttggtaaaaagtcattccgaaaactgtcctgtaatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 639 gtttcatctggattatcttatctgttggtaaaaagtcattccgaaaactgtcctataatc 580
Query: 181 ccttttgtttctatagaacccatacggatgtccttgctttttgagttgctctctttccat 240
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 579 ccttttgtttctatagaacccatacagatgtccttgctttttgagttgctctttttccat 520
Query: 241 agtcaagctgac-aaaggttaaccagttttattgaacattagagagaattggttttagtt 299
|||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 519 agtcaagctgacaaaagattaatcagttttattgaacattagagagaattggttttagtt 460
Query: 300 ttgcttgatacttcttgattcaaactgcagtgtgctgggtcccctccaactttcaggcct 359
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttgcttgatacttcttgaaacaaactgcagtgtgctgggtcccctccaactttcaggcct 400
Query: 360 ttaacagagtttatttctagagtattcacaattcacagaacttccaataagactgcagtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttaacagagtttatttctagagtattcacaattcacagaacttccaataagactgcagtg 340
Query: 420 tgggtgggaggtagacgctggggcttcctactcatcaaaagtccccaaatccttcctcgt 479
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgggtgggaggtagatgctgggacttcctactcatcaaaagtccccaaatccttcctcgt 280
Query: 480 ggttaaacatttttcaagaatatggagttcacaaatagcaacacttctgtgcagtgggtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 279 ggttaaacatttttcaagaatatggagttcacaaatagcaacacttctgtgcaatgggtg 220
Query: 540 ttctctttcttttaaagagggataaaaaatagactattatagccacctgttgcgatgtgg 599
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 219 ttctctttcttttaaagagggataaaaaatagactaatatagccacctgttgcgatgtgg 160
Query: 600 gagaagttgcagttc 614
||||||||||||||
Sbjct: 159 aagaagttgcagttc 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space: 607020
Effective search space used: 607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_m16.g1 MSMg01no062_m16.g1 CHROMAT_FILE:
MSMg01no062_m16.g1 PHD_FILE: MSMg01no062_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:45 2005
(549 letters)
>mm_chr8_82171620_82172568
Length = 949
Score = 1054 bits (545), Expect = 0.0
Identities = 548/549 (99%)
Strand = Plus / Plus
Query: 1 cctgtcttaaacaaacaagaatgtttttgtgaactctgttaaagtcctctcttccagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgtcttaaacaaacaagaatgtttttgtgaactctgttaaagtcctctcttccagccc 260
Query: 61 tatggatttaacatccatccatagcttagttgttcacaaatcgccagcacgaattataga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatggatttaacatccatccatagcttagttgttcacaaatcgccagcacgaattataga 320
Query: 121 gtgttcagtcattctttaagaagttcccatgtgcttttttttagtgcctaatttggctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgttcagtcattctttaagaagttcccatgtgcttttttttagtgcctaatttggctcc 380
Query: 181 tggtaattatcaattaatctgctttctaggttttgcttttttagatttatagaaggaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtaattatcaattaatctgctttctaggttttgcttttttagatttatagaaggaatg 440
Query: 241 acaaagtttgtggtcttacatgtttgttttgtttacgtaatggggatacttttaagagtc 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 acaaagtttgtggtcttacatgtttggtttgtttacgtaatggggatacttttaagagtc 500
Query: 301 attcacattgtttttattgctattttgtagggagttagtctttaggataggtggacagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attcacattgtttttattgctattttgtagggagttagtctttaggataggtggacagac 560
Query: 361 cttatttgttaatcagacttggctgtttcccacttgtgggctcttagaattggactttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttatttgttaatcagacttggctgtttcccacttgtgggctcttagaattggactttat 620
Query: 421 tttctcttggagaatggaattgttgggtcataggctaaatatatatttagcttaatgaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttctcttggagaatggaattgttgggtcataggctaaatatatatttagcttaatgaga 680
Query: 481 aactttccagcttttccagagtggctgtacagtttttgtttacttatgagccatgtagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactttccagcttttccagagtggctgtacagtttttgtttacttatgagccatgtagct 740
Query: 541 ctatagttt 549
|||||||||
Sbjct: 741 ctatagttt 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
