Query= MSMg01no065_b14.b1 MSMg01no065_b14.b1 CHROMAT_FILE:
MSMg01no065_b14.b1 PHD_FILE: MSMg01no065_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:30 2005
(621 letters)
>mm_chr8_101011827_101012847
Length = 1021
Score = 787 bits (407), Expect = 0.0
Identities = 419/423 (99%)
Strand = Plus / Minus
Query: 5 gaattcctggaatgcccttgggtcagttaccctgctatacatagcagtgaacagtgaaga 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaattcctggaaggcccttgggtcagttaccctgctatacatagcagtgaacagtgaaga 364
Query: 65 gatgttatttcaaagaagcaacagggcaagaactgaaacataaggtttttcctcttcctc 124
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gatgttgtttcaaagaagcaacagggcaagaactgaaacataaggtttttcctcttcctc 304
Query: 125 caagcatattgtatctcttcatccagggaaccagcccagcagcaggtactgtggaaagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caagcatattgtatctcttcatccagggaaccagcccagcagcaggtactgtggaaagca 244
Query: 185 gggatgggtagcactaggggttttcagtgacaaaacttggttttgcaagggcaaaagttg 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gggatgggtagcactagaggttttcagtgacaaaacttggttttgcaagggcaaaagttg 184
Query: 245 cttacttttagcaatatttacctttcttaattctttactattctaagaccaaaagccata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cttacttttagcaatatttacctttcttaattctttactattctaagaccaaaagccata 124
Query: 305 ggcttctggtaattaactcctgctgcttagcctgaggggataaagaagaaaagagggtta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggcttctggtaattaactcctgctgcttagcctgaggggataaagaagaaaagagggtta 64
Query: 365 attggtcagctcttttttctctggttcaaggatttctccctagtcagggtagaggcttgg 424
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 attggtcagctctcttttctctggttcaaggatttctccctagtcagggtagaggcttgg 4
Query: 425 aac 427
|||
Sbjct: 3 aac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_b14.g1 MSMg01no065_b14.g1 CHROMAT_FILE:
MSMg01no065_b14.g1 PHD_FILE: MSMg01no065_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:31 2005
(517 letters)
>mm_chr8_100925789_100926706
Length = 918
Score = 859 bits (444), Expect = 0.0
Identities = 453/456 (99%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 1 tcaaatggaataaaaatactgtcattcattagaaacatttcatacaattcaacttatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaatggaataaaaatactgtcattcattagaaacatttcatacaattcaacttatttt 260
Query: 61 taaaatttttgtactctcaaaagtatttatgccaacactgaaagggaaaaagatgaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaatttttgtactctcaaaagtatttatgccaacactgaaagggaaaaagatgaaagt 320
Query: 121 atgatatacactttgaaataactgaaaatattatttgaatagtaattttaaagtgaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgatatacactttgaaataactgaaaatattatttgaatagtaattttaaagtgaaaat 380
Query: 181 aatatagttgttatataaaataattgcaaaataccttataatagttttcattttttaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatagttgttatataaaataattgcaaaataccttataatagttttcattttttaaaa 440
Query: 241 aaattactacatattaatcatcatgactttacaaaaaacaaa-ggtgagtaggacaaatc 299
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 441 aaattactacatattaatcatcatgactttacaaaaaaaaaaaggtgagtaggacaaatc 500
Query: 300 agaaggtaaagaaatgttaggcttccaagtcaaatgacctgcgtttgacccgcagatact 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaggtaaagaaatgttaggcttccaagtcaaatgacctgcgtttgacccgcagatact 560
Query: 360 acatggttgaaggtggaggactaatttctgtaagctgttctttaacctacacacgtatgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 acatggttgaaggtggaggactaatttctgtaagctgttctttaacctacatacgtatgt 620
Query: 420 agaaaataaataaatgtaatttaaaaatgaagtcaa 455
||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaaataaataaatgtaatttaaaaatgaagtcaa 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space: 460356
Effective search space used: 460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
