CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAAAGGGAGAGGAAAGCTGTCCACAGGAGACCTCTGTTTTATTGTGGTT
TAGCTCATGGAGCAAATACGTTTAGTGGTTTCGGTCTACTTCCTTCAAAA
AATGTCCACACTAAAAATGGCCACCCACATTAGCAGACACTGGTATAATG
CTAACAGCCTAGAAAAGAGAAGTCTCCATCCAGGGCCAATGTCCACTTCC
AACACTTACTATGTTTCTTTTCCTTTGGGAAGAGATTTAAGTAGAATCCA
GAGAAGTTATTCTGTGGGTCTAAAAAATAAAAAATAAAAAGTAAAATAAA
TCGTGCACTCTAAACCCAAAACCATTAAATCAAAATAATTTATTATCCTC
CATTTTTAACCATAAATGGAGATCATCAACTCTGGGATCAACGAAAGTGA
ACTATTCCCCAGTTGGTTACAAAATTTATTCAGATGTCACAGAATAGTGA
CCTGGTAGCCTGCCCAGACTAAGGGAGGTGGAACGTTACAAATGAGCAGG
CAGTTGGGCTGTACAAAATTCTTTCCTAAGACAGTATAGCATTGTCAAAA
CTTTTATGCTCATTATTTTGTGTCACATTTCCTACAGAATAGCTTGTCAG
CTCATTCAGA

ATTCATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCTCATTT
TTTAATGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTTT
ATATATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTT
TCCCAATCTGTTGGAGGCCTAAAATGTTCTATATAGTTTGTCTCTCTGAC
CTAACAAACATTGTTGTTGTTGTTTTTTTAATTATTTTCTTTATTTGCAT
TTCAAATGCTATCCCGAAAGTTCCATATACTCTCCCTCTGCCCTGCTCCC
CCACCCATATTTTCTCTTCTTGGCCCTGGCATTCCCCTGACTGGGGCATA
TAAAGTTTGCAAGACCAAGGAGCCTCTCTTCCCAATGATGGTCGACTAGG
CCATCTTCTGCTACATATTTAGCTAGAAAAACGAGCTCTGGGGGTACTGG
TTAGTTCATACTGATGTTCAACCTATAGGGTTGCAGACCCCTTCATCTCC
TTGTGTTTTGGTCTGTATAAATATGAAGTCTGTAACCAATGGTCGTATGA
GCACAGAATAATCTAAATCTGGTCCTAAGGTTATTATTTTGTCAAATGCT
CACTGAAACAATAAAAGTTCC

Query= MSMg01no067_d18.b1 MSMg01no067_d18.b1 CHROMAT_FILE:
MSMg01no067_d18.b1 PHD_FILE: MSMg01no067_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:17 2005
         (616 letters)



>mm_chr8_6962579_6963594
          Length = 1016

 Score =  973 bits (503), Expect = 0.0
 Identities = 506/507 (99%)
 Strand = Plus / Minus

                                                                        
Query: 110  atgtccacactaaaaatggccacccacattagcagacactggtataatgctaacagccta 169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 atgtccacactaaaaatggccacccacattagcagacactggtataatgctaacagccta 957

                                                                        
Query: 170  gaaaagagaagtctccatccagggccaatgtccacttccaacacttactatgtttctttt 229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  gaaaagagaagtctccatccagggccaatgtccacttccaacacttactatgtttctttt 897

                                                                        
Query: 230  cctttgggaagagatttaagtagaatccagagaagttattctgtgggtctaaaaaataaa 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 896  cctttgggaagagatttaagtagaatccagagaagttattctgtgggtctaaaaattaaa 837

                                                                        
Query: 290  aaataaaaagtaaaataaatcgtgcactctaaacccaaaaccattaaatcaaaataattt 349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  aaataaaaagtaaaataaatcgtgcactctaaacccaaaaccattaaatcaaaataattt 777

                                                                        
Query: 350  attatcctccatttttaaccataaatggagatcatcaactctgggatcaacgaaagtgaa 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  attatcctccatttttaaccataaatggagatcatcaactctgggatcaacgaaagtgaa 717

                                                                        
Query: 410  ctattccccagttggttacaaaatttattcagatgtcacagaatagtgacctggtagcct 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  ctattccccagttggttacaaaatttattcagatgtcacagaatagtgacctggtagcct 657

                                                                        
Query: 470  gcccagactaagggaggtggaacgttacaaatgagcaggcagttgggctgtacaaaattc 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  gcccagactaagggaggtggaacgttacaaatgagcaggcagttgggctgtacaaaattc 597

                                                                        
Query: 530  tttcctaagacagtatagcattgtcaaaacttttatgctcattattttgtgtcacatttc 589
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  tttcctaagacagtatagcattgtcaaaacttttatgctcattattttgtgtcacatttc 537

                                       
Query: 590  ctacagaatagcttgtcagctcattca 616
            |||||||||||||||||||||||||||
Sbjct: 536  ctacagaatagcttgtcagctcattca 510


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)