Query= MSMg01no068_o16.b1 MSMg01no068_o16.b1 CHROMAT_FILE:
MSMg01no068_o16.b1 PHD_FILE: MSMg01no068_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:30 2005
(634 letters)
>mm_chr8_65588593_65589626
Length = 1034
Score = 1152 bits (596), Expect = 0.0
Identities = 620/628 (98%)
Strand = Plus / Minus
Query: 7 ggaattccctctatggtccgattttacacatatttgtgtgtgtgtgtgtgtgtgtgtgtg 66
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 ggaattccctctatgggctgattttacacatatttgtgtgtgtgtgtgtgtgtgtgtgtg 848
Query: 67 tgtgtgtgtgtgttcttccatctgcagacttttacattattttccttgtttacttattca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 tgtgtgtgtgtgttcttccatctgcagacttttacattattttccttgtttacttattca 788
Query: 127 ttagtttttgacaatgttttggctttgttaaaccttggaagtttttcaagatggatagca 186
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Sbjct: 787 ttagtttttgacaatgttttggctttgttaaaccttggaagtttttcaagatggatagca 728
Query: 187 catgtatttctttttttacagaagtgtttactcaaccacaatttcttttccttcaaaggg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 catgtatttctttttttacagaagtgtttactcaaccacaatttcttttccttcaaaggg 668
Query: 247 ctttgtgtgaacataagtttttccttgtcttcagtttgggtgcaaaatatgctactcagg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ctttgtgtgaacataagtttttccttgtcttcagtttgggtgcaaaatatgctactcagg 608
Query: 307 gattcagtaaagacctagaaaaattgctcccaattgaataaactttgttctagaaaaatg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gattcagtaaagacctagaaaaattgctcccaattgaataaactttgttctagaaaaatg 548
Query: 367 aagccaacatgagttattgaaaaaaataactgattgtcactcatgtgcaaaatctcacat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aagccaacatgagttattgaaaaaaataactgattgtcactcatgtgcaaaatctcacat 488
Query: 427 aggaaaatatacatcctgtaagtatttactatagctaatagtagaccttggtcaatttca 486
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 487 aggaaaatatacatcctgtaagtatttactatagctaatattagaccttggtcaatttca 428
Query: 487 tctctttaaaaaattaattgcttgttttacatgaaagtgtacacataagagaatgtattg 546
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 427 tctctttaaaaaattaattgcttgttttacatgaaaatgtatacataagagaatgtattg 368
Query: 547 tgtattatgtgtaaaatgtgctatggtatcacttaaaatatctttttcctcatgttgcaa 606
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtattatgtgtaaaatgtgctatagtatcacttaaaatatctttttcctcatgttgcaa 308
Query: 607 tggctgaatttctttctattttgagatg 634
| |||||||||||||||| |||||||||
Sbjct: 307 tagctgaatttctttctactttgagatg 280
Score = 62.6 bits (32), Expect = 9e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 47 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 78
||||||||||||||||||||||||||||||||
Sbjct: 281 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 250
Score = 62.6 bits (32), Expect = 9e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 45 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 76
||||||||||||||||||||||||||||||||
Sbjct: 281 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 250
Score = 62.6 bits (32), Expect = 9e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 43 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 74
||||||||||||||||||||||||||||||||
Sbjct: 281 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 250
Score = 62.6 bits (32), Expect = 9e-14
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 41 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 72
||||||||||||||||||||||||||||||||
Sbjct: 281 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 250
Score = 60.7 bits (31), Expect = 3e-13
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 49 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 79
|||||||||||||||||||||||||||||||
Sbjct: 281 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 91
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 6
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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