Query= MSMg01no069_a05.b1 MSMg01no069_a05.b1 CHROMAT_FILE:
MSMg01no069_a05.b1 PHD_FILE: MSMg01no069_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:38 2005
(292 letters)
>mm_chr8_61156615_61157308
Length = 694
Score = 491 bits (254), Expect = e-143
Identities = 281/290 (96%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 2 aaaggaagaag-cctggcagccaaa-tacctcgtctgtttattctagggctaacacctgc 59
||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||
Sbjct: 202 aaaggaagaagtcctggcagctaaaatacctcgtctgtttattctagggctaacaattgc 261
Query: 60 tggctcggcttttgatattacagggcactcaatattagaaaactcttagagaggcacttt 119
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 262 tggctcggcttttgatgttacagggcactcagtattagaaaactcttagagaggcacttt 321
Query: 120 gccagaatctataccgacagggaaaataacttttattcaacttattaaatttcacatggt 179
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gccaaaatctatacggacagggaaaataacttttattcaacttattaaatttcacatggt 381
Query: 180 ttctccctggccgcaatggaggctgaaaggagatgcagcgatgtattatgaggcctggca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttctccctggccgcaatggaggctgaaaggagatgcagcgatgtattatgaggcctggca 441
Query: 240 gggaggggttattcatgctctctctgatactgggacttggcaggggactc 289
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gggaggggttattcatgctctctctgatactgggacttggcaggggactc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 694
Length adjustment: 9
Effective length of query: 283
Effective length of database: 685
Effective search space: 193855
Effective search space used: 193855
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_a05.g1 MSMg01no069_a05.g1 CHROMAT_FILE:
MSMg01no069_a05.g1 PHD_FILE: MSMg01no069_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:38 2005
(166 letters)
>mm_chr8_61269355_61269919
Length = 565
Score = 313 bits (162), Expect = 3e-90
Identities = 165/166 (99%), Gaps = 1/166 (0%)
Strand = Plus / Minus
Query: 1 acatgccaaacagcacttcagaagcttatgaatattttctgcattaaaaaataacatagt 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acatgccaaacagcac-tcagaagcttatgaatattttctgcattaaaaaataacatagt 307
Query: 61 ttctccaataagagtttgtctttaaggaaaaaacctcactgttttaaattgttaacaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttctccaataagagtttgtctttaaggaaaaaacctcactgttttaaattgttaacaaac 247
Query: 121 aatatgaacttttcagaagattcaatattgctctttattaatttag 166
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aatatgaacttttcagaagattcaatattgctctttattaatttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 565
Length adjustment: 8
Effective length of query: 158
Effective length of database: 557
Effective search space: 88006
Effective search space used: 88006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
