Query= MSMg01no071_f17.b1 MSMg01no071_f17.b1 CHROMAT_FILE:
MSMg01no071_f17.b1 PHD_FILE: MSMg01no071_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:43 2005
(244 letters)
>mm_chr8_24534755_24535398
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 239/242 (98%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 1 gaggaaaaaagagaaaacgtaaaaaacaaaacaaaacaaaacaaaaaaaaccctaaaaga 60
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 204 gaggaaaaaagagaaaacgtaaaaaacaaaacaaaacaaa--aaaaaaaa-cctaaaaga 260
Query: 61 ttaaggaacacaatggaatatctaggtgattctccgtttagcagaaggtttttatgaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaggaacacaatggaatatctaggtgattctccgtttagcagaaggtttttatgaggt 320
Query: 121 agtttggttgcttcaagatgccacagttaaacaaaccaaacaggaacaggcagccccgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttggttgcttcaagatgccacagttaaacaaaccaaacaggaacaggcagccccgcc 380
Query: 181 cctcccccaagcctcagaccctctctcttctagaagtgaaggagatccgggcgcttgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcccccaagcctcagaccctctctcttctagaagtgaaggagatccgggcgcttgctt 440
Query: 241 ta 242
||
Sbjct: 441 ta 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no071_f17.g1 MSMg01no071_f17.g1 CHROMAT_FILE:
MSMg01no071_f17.g1 PHD_FILE: MSMg01no071_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:44 2005
(332 letters)
>mm_chr8_24638609_24639340
Length = 732
Score = 632 bits (327), Expect = 0.0
Identities = 330/331 (99%)
Strand = Plus / Minus
Query: 2 tatatttctcttggatcatactgataaaagtcattattgagcaacatgactccatagcta 61
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 tatatttctcttggatcatactgataaaagtcattattgagcaacatgattccatagcta 321
Query: 62 tccaaatggctctatgagaatttgctcaataaaatgtgaataaacttttaataaaatcct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tccaaatggctctatgagaatttgctcaataaaatgtgaataaacttttaataaaatcct 261
Query: 122 aaataaggaaattaaagaacagatatggttggatataatgcagaaacattatatatgatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaataaggaaattaaagaacagatatggttggatataatgcagaaacattatatatgatt 201
Query: 182 tttgttgttgtttttcaagacagggtttctttgtgtagccctgactatcctggaactcaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tttgttgttgtttttcaagacagggtttctttgtgtagccctgactatcctggaactcaa 141
Query: 242 aggatccacctgcctctgcctcctgagtgctgggattaaaggtgtgtgccaccgttgcct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aggatccacctgcctctgcctcctgagtgctgggattaaaggtgtgtgccaccgttgcct 81
Query: 302 ggctgtgtttttgccaaggaccagcctcagc 332
|||||||||||||||||||||||||||||||
Sbjct: 80 ggctgtgtttttgccaaggaccagcctcagc 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
