AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGAGATCCGC
GGAATTCAAGGAATATCACAGTCATTAGGGAATATGCCAATTATGTCTAC
ACCACTGTCTTCGGCATTAGTCACCCAAGCAGGTATAAAGGCTGTAAATG
TTTCCTTTTGCTAAATACAACCATGAACTGTAGTTCTACCAAGATTACTT
AGAAATGGAACTAATAATACTTTTGGCATCTCAGGGTCTACAGTGTAGTC
CATATCTTTAGAAAATTTTATAACCTATTGATTGAATAGCCTGAATTTGT
TGACTGTATTGTTTGGCAAATGCTTGATAGCCAATAGATTTAATACATTG
TTAATTATCCCAGTCTCCTTAAAATAGTATTTTCATTTTTATAACCAAGA
ATATTTAGAGGCTAATTAGAAATCCAGTAATGTGAATTGTAAATTATGTG
TAATTACAATAAAAACTAGTGAAGAATAACACACATTACTTATAAATTGT
AACACTGTGATAAATTAAAGCAATTACAGGTAAACCAATAATGTTCTTTA
ATTAAGTAGTTATGAATGAGAATTTGTGCTTCGCATTCACAATAACCTAT
AAGGTTGAGGATTGCGTTCCTGGCTTCTGCAGAAATCGATTGCACTCTGC
TGTGACACTCTGCTAAGAATAACTCCTAGGTTCATTACTGGCATTATGCC
ATGA

CCCCTCGATGACAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCTGTGTGTGTGTGTGTGTAG
GTGTGTGTGTGTGTGTGTGTGTGTGTATATATAAATTACATATTATCTAA
TTTCTCTTCACCTTCTATCCCTCCCACTCTCTCCTACTCCCTCTCCACAT
ACCTTATTACAAACTACTTCTATATTTTATTACTTTTTCTCTTTTTTATA
ATTTTACTTATTTTTCACCTACTCTACCCCTCCTTAATCCCATAAACATA
TTAACTCAAAAAAAAAAAACCAAACACAACATTTTATTTAAAACAAAAAT
TTAAAAAAACACCTCTATTACTCCTTATCTACCACCCACATTCACCCACC
TACTTCTCATCATCTCCGTTTAGACCTTCTTTTTTTTACTCTACCCCCCC
TCCTTCCCTTCCATCACCACAGCACGTTCGTTTCAATCTTTTCTTCTACA
ACACTCCGCCTTCTTTAGATTTCGCATCACCAACCATCTCCACCCACCCA
CCTCTCCTCCCACACTCATATATTCACCGCTACTCCCCTTCTCCTCCCCA
CTATAACCCTCCACTGANTCATCAACATCGAACTTATTTCAACCTACTTT
CTACTTCCAACCACACCTCTCCACTCTTTTTTCCATCCCACTACTATCAC
CCACACCCGTCACTCCTTTATTTCCAATTTTATACTACCTCATTTTCACA
TCTTTTTATCCACACACCCTCTATTATCTCCCAACAATAAATACA

Query= MSMg01no072_h02.b1 MSMg01no072_h02.b1 CHROMAT_FILE:
MSMg01no072_h02.b1 PHD_FILE: MSMg01no072_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:11 2005
         (614 letters)



>mm_chr8_50129895_50130909
          Length = 1015

 Score = 1127 bits (583), Expect = 0.0
 Identities = 604/611 (98%), Gaps = 1/611 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaggaatatcacagt-cattagggaatatgccaattatgtctacaccactgtct 63
           ||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaggaataggaaagttcattagggaatatgccaattatgtctacaccactgtct 264

                                                                       
Query: 64  tcggcattagtcacccaagcaggtataaaggctgtaaatgtttccttttgctaaatacaa 123
           || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 tcagcattagtcacccaagcaggtataaaggctgtaaatatttccttttgctaaatacaa 324

                                                                       
Query: 124 ccatgaactgtagttctaccaagattacttagaaatggaactaataatacttttggcatc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 ccatgaactgtagttctaccaagattacttagaaatggaactaataatatttttggcatc 384

                                                                       
Query: 184 tcagggtctacagtgtagtccatatctttagaaaattttataacctattgattgaatagc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagggtctacagtgtagtccatatctttagaaaattttataacctattgattgaatagc 444

                                                                       
Query: 244 ctgaatttgttgactgtattgtttggcaaatgcttgatagccaatagatttaatacattg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgaatttgttgactgtattgtttggcaaatgcttgatagccaatagatttaatacattg 504

                                                                       
Query: 304 ttaattatcccagtctccttaaaatagtattttcatttttataaccaagaatatttagag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaattatcccagtctccttaaaatagtattttcatttttataaccaagaatatttagag 564

                                                                       
Query: 364 gctaattagaaatccagtaatgtgaattgtaaattatgtgtaattacaataaaaactagt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctaattagaaatccagtaatgtgaattgtaaattatgtgtaattacaataaaaactagt 624

                                                                       
Query: 424 gaagaataacacacattacttataaattgtaacactgtgataaattaaagcaattacagg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaagaataacacacattacttataaattgtaacactgtgataaattaaagcaattacagg 684

                                                                       
Query: 484 taaaccaataatgttctttaattaagtagttatgaatgagaatttgtgcttcgcattcac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaaccaataatgttctttaattaagtagttatgaatgagaatttgtgcttcgcattcac 744

                                                                       
Query: 544 aataacctataaggttgaggattgcgttcctggcttctgcagaaatcgattgcactctgc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aataacctataaggttgaggattgcgttcctggcttctgcagaaatcgattgcactctgc 804

                      
Query: 604 tgtgacactct 614
           |||||||||||
Sbjct: 805 tgtgacactct 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space:   607020
Effective search space used:   607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)