ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTCAATCTTCTTGTATCTGTTGAGGCCTATTTTGTGACAGATTATAT
GGTCAATTTTGGAAAAGGACCATCAGGTGCTGACAATTTTGTTGACAGAA
TCCAAATACTTAAGTTAAATCGGGATCAGATAAATCATCTAAACAGTCTC
ATAACCCCTGAAGAAATAGAAGCAGTTGTGGGACTTTTGGGATAGCATTG
GAAATGTAAACGAAATAAATACCTAATTAAAAAAAAAAGTCTCCCAAACA
AACAAAGAGTCTAGGAACAGATGGGTTTAGTGCAGAATTCTATCAAACCT
TCAAAGAAGATTTTTTACCCCCACCCCTCAAGCTATTCAACAAAATATAA
ACAGAAGTAAAACTACCCAATTCATCACAAATACACTGCATATTCTCCCT
TTGGGATGGGACAGTTTCTGTCTAATCAGGAACCTGTCATAATTTTCTTT
CATGGAGGACTTCCTAAGAGATTTTTTTCTTCTTCTATCATGTGTAATGT
TCCAAATACACTTCTGAAACTGTTTGAGTGCATACTACTTTTAGCTTCAG
AAGATATCATGTGCATTTAAGGGCATTTAGCTATTACAAATTATTTTTGG
TGACTTAAAAAATGTCCATACTGAAATGTATATTTTAAAATAAATTTTAA
TTAATTATTTTAAAAAAAGACTTCTT

ACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTATTTGTTCATTAAATTCCCTTAGC
TCTTTTCCTGCTACTCTACAGACAGATTGAGTTACTTATATGTGTTTGGC
TTCTTTAAGTGAAAGAAATATGTAATTTATATATAACATCCTATATTTTA
ATTTTATTATTTTTCATCCTGTAAACATGCGCTCTTTTACTATTTCCCTT
TAATTGATTTTTGGACTGATGGGTAACTAGGTTAATTCCATTAATTTTGT
TGACATCATCATTGTCGACAAAACTCATCAACTTTCAATTTCTTGTGGTT
ATTTTTATATTGATGCCATATACATAGCTAGAAGCTGAGCTAATAGGTCA
CAGACTGCCTGTAAATGTTGTTCAAAATGAGATGAGGCTGGAAAGAGAGA
TGTAAGGATTTCCTGTAGTGATGTAATATGCTATGCCTTCATAAGGATTT
GCTTACACAAGTGTGCATATTTAGCAAAGCTCATGTGATGAATACCCTTA
AATTGATGCAGTTAATGAGTCTACATTTTTTTTAAAAGTACCGAACATTG
AAACCAGGGCTTCCTAGATGGAGGCAAAGGCTGATTTCTCTGTTACATAG
CCAGCCACAGTTTGTGCATCTAAAAGTATGTATAACATTTATTTAGAAAA
TGGACACCATAAAACGTTTGGAA

Query= MSMg01no073_g09.g1 MSMg01no073_g09.g1 CHROMAT_FILE:
MSMg01no073_g09.g1 PHD_FILE: MSMg01no073_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:27 2005
         (545 letters)



>mm_chr8_104994325_104995269
          Length = 945

 Score =  926 bits (479), Expect = 0.0
 Identities = 530/547 (96%), Gaps = 4/547 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatttgttcattaaattccctt-agctcttttcctgctactctacagacagattgagtt 59
           |||||| || |||||| | |||| | |||||||||||||||||| |||||||||||||||
Sbjct: 701 ttatttatttattaaact-ccttaaactcttttcctgctactctccagacagattgagtt 643

                                                                       
Query: 60  acttatatgtgtttggcttctttaagtgaaagaaatatgtaatttatatataacatccta 119
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 642 acttatatgtgtttggcttctttaagtgaaagaaatatgtgatttatctataacatccta 583

                                                                       
Query: 120 tattttaattttattatttttcatcctgtaaacatgcgctcttttactatttccctttaa 179
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 582 tattttaattttattatttttcatcctgtaaacatgcactcttttactatttccctttaa 523

                                                                       
Query: 180 ttgatttttggactgatgggtaactaggttaattccattaattttgttgacatcatcatt 239
           ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 522 ttgatttttggactgatgggtaactaggtcaatttcattaattttgttgacatcatcatt 463

                                                                       
Query: 240 gtcgacaaaactcatcaactttcaatttcttgtggttatttttatattgatgccatatac 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtcgacaaaactcatcaactttcaatttcttgtggttatttttatattgatgccatatac 403

                                                                       
Query: 300 atagctagaagctgagctaataggtcacagactgcctgtaaatgttgttca-aaatgaga 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 402 atagctagaagctgagctaataggtcacagactgcctgtaaatgttgttcagaaa-gaga 344

                                                                       
Query: 359 tgaggctggaaagagagatgtaaggatttcctgtagtgatgtaatatgctatgccttcat 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 343 tgaggctggaaagagagatgtaaggatttcctgtagtgatgtaatatgctattccttcat 284

                                                                       
Query: 419 aaggatttgcttacacaagtgtgcatatttagcaaagctcatgtgatgaatacccttaaa 478
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aaggatttgcttagacaagtgtgcatatttagcaaagctcatgtgatgaatacccttaaa 224

                                                                       
Query: 479 ttgatgcagttaatgagtctacattttttttaaaagtaccgaacattgaaaccagggctt 538
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 223 ttgatgcagttaatgagtctacattttttttaaaagtaccgaacattgaaaccagggcct 164

                  
Query: 539 cctagat 545
           |||||||
Sbjct: 163 cctagat 157


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)