Query= MSMg01no075_h12.b1 MSMg01no075_h12.b1 CHROMAT_FILE:
MSMg01no075_h12.b1 PHD_FILE: MSMg01no075_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:08 2005
(493 letters)
>mm_chr8_115310103_115310996
Length = 894
Score = 849 bits (439), Expect = 0.0
Identities = 451/455 (99%), Gaps = 1/455 (0%)
Strand = Plus / Minus
Query: 4 ggaattctagaaaac-cataattttcatagttacccatatttaaaacaatggctcttttt 62
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggaattctagaaaacaaataattttcatagttacccatatttaaaacaatggctcttttt 396
Query: 63 tttttccagatctttctttcctaggcattgattgctctgacaacggcttgtgttttgaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttttccagatctttctttcctaggcattgattgctctgacaacggcttgtgttttgaga 336
Query: 123 cacaataggaaacacttatccttagaaacacggctcagtcactacttgcacacagactaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cacaataggaaacacttatccttagaaacacggctcagtcactacttgcacacagactaa 276
Query: 183 caatattgtaaattattaacatttaactaacacatctgttaaatatttatgttgcgtttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 caatattgtaaattattaacatttaactaacacatctgttaaatatttatgttgcgtttt 216
Query: 243 actaaatagtactgtgatgcttagttttaattaccatcttgctacaatctagaatctcct 302
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 215 actaaatagtactgtgatgcttagttttaattatcatcttgctacaatctagaatctcct 156
Query: 303 gggaagagagttccaatgaggaattatgtaaggaaagttggtctgtgtgcctgtctgtgg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gggaagagagttccaatgaggaattatgtaaggaaagttggtctgtgtgcctgtctgtgg 96
Query: 363 atgattatctcctgggaagacttgggccacggtgggtagcatcattacatttgctagaca 422
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgattatctcctgggaagactcgggccacggtgggtagcatcattacatttgctagaca 36
Query: 423 gtgtaagtgcagaaaaagctagcttgagcactaag 457
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gtgtaagtgcagaaaaagctagcttgagcactaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 894
Length adjustment: 10
Effective length of query: 483
Effective length of database: 884
Effective search space: 426972
Effective search space used: 426972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_h12.g1 MSMg01no075_h12.g1 CHROMAT_FILE:
MSMg01no075_h12.g1 PHD_FILE: MSMg01no075_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:08 2005
(326 letters)
>mm_chr8_115245075_115245800
Length = 726
Score = 543 bits (281), Expect = e-159
Identities = 293/297 (98%)
Strand = Plus / Plus
Query: 1 attttccgttggctaagtactgctgggcatggggactacccaggagcaagactgatatac 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttccattggctaagtactgctgggcatggggactacccaggagcaagactgatatac 260
Query: 61 ccagggacattccattgaggaaaacagattttctgtttgccagccattattaattgcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagggacattccattgaggaaaacagattttctgtttgccagccattattaattgcaaa 320
Query: 121 aaacttctcagttaaggatggaatgccacatctattccccatctcagttctggaaaccca 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 aaacttctcagttaaggatggaatgccacatctattccccatttcagttctggaaaccca 380
Query: 181 tctggcttgtgaagttttacagtaagaatttttgcagatactggttaaggatttgaaaac 240
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tctggcttgtgaagttttgcagtaagattttttgcagatactggttaaggatttgaaaac 440
Query: 241 tcacagcctgtgaattttcactatgttggatttgatcaaattctctttctgcatctg 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacagcctgtgaattttcactatgttggatttgatcaaattctctttctgcatctg 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
