GGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGCATCTCACAGGTTGAATCTTAATAAAAGAGCAACACACATA
GTGTGTAATGTACATGACATTACAGAACCTTAGAGGAGTAACTGGTACTC
ACCCTAAGCTGGGAAGGGTACATGTTAGGAATCAAAGGAAGTTGCTAAGG
ATAAAAGAGTAGATGATATCCTCACATTCATTGTATATCCATCTGAAATT
ATGTCTTGGATTCATTTGCTCAGATTTGTTAATAATTTCTGACACTTGTT
AACTGATAGCTGTTCCTCAATGTAGTAAATAGAAATTAGTGGTGGCCTAC
AGAATTAAAGAAACTGCATCCCTTTGACCCTCCAAACAGGTTTCCTCCTC
CTTTGACAAGAAATGAAAGCAGCAATCCTTGAAGTTGTTGCAGAGAGGCT
TCCAGGAAATACTTCTTGTATCCTCTCATTTGTATGCCATCAGTTTGAAT
GAGGACTGGTGCCTTATGGCGCTACTGCTGTGTATTTACTCCTCGATCCA
GGCTTATTCTATTCCGATTTTTTATTTGTCGTCTGTTTTATACGTCTAGC
ATCCTTTGCCTTTCATTTTTTCCTCTCATTCCTTCTCAAATCGTTTGACT
ATCTCTGCTGTCGCTCCTTTTCCATTCCTCTATCTTTTACCTTTCTCTTC
GCTCTCTGTCCTTTCTTTTC

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATACTTAAACATGATAAAAG
CAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTG
GAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGTCCACTTTCTCC
CTATCTATTCAACATAGTACTTGAAGTCCTAGCCAGAGCAATTCGACAAC
AAAAGGAGATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAAATATCA
CTTTTTGCAGATGATATGATATTATATATAAGTGACCCTAAAAATTCCAC
CAGACAACTTCTAAACCTGATAAACAGGTTCAATGAATTATCTGAATATA
AAATTGACTCAAACAAGTAAATGGCCTTTCTCTATACAAAGGATAAACAG
GCTTAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATTA
TATAAAATATCTTAGCGTGACTCTAACTAAGGAAGTGCAAGATCTGTATG
ATAAGAACTTCATCTTCTCAGAAGATGGAAAGATCTCCCATGCTCATGGA
TTGACAAGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGTAATCTAC
AGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACAAATT
GGAAATGGCAA

Query= MSMg01no076_o06.b1 MSMg01no076_o06.b1 CHROMAT_FILE:
MSMg01no076_o06.b1 PHD_FILE: MSMg01no076_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:02 2005
         (431 letters)



>mm_chr8_52200408_52201233
          Length = 826

 Score =  702 bits (363), Expect = 0.0
 Identities = 404/427 (94%), Gaps = 16/427 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgcatctcacaggttgaatcttaataaaagagcaacacacatagtgtgtaatgt 64
           ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 587 gaattctgcatctcagaggttgaatcttaagaaaagagcaacacacatagtgtgtaatgt 528

                                                                       
Query: 65  acatgacattacagaaccttagaggagtaactggtactcaccctaagctgggaagggtac 124
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 527 acatgacattacagaaccttagaggagtaactggtcctcaccctaagctgggaagggtcc 468

                                                                       
Query: 125 atgttaggaatcaaaggaagttgctaaggataaaagagtagatgatatcctcacattcat 184
           ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||
Sbjct: 467 atgttaggaatcaaaggaagttgctaaggataaa-----agatgatatcctcacattcat 413

                                                                       
Query: 185 tgtatatccatctgaaattatgtcttggattcatttgctcagatttgttaataatttctg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgtatatccatctgaaattatgtcttggattcatttgctcagatttgttaataatttctg 353

                                                                       
Query: 245 acacttgttaactgatagctgttcctcaatgtagtaaatagaaattagtggtggcctaca 304
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 352 acacttgttaactgatagctgttcctcagtgtagtaaatagaaattagtggtggcctaca 293

                                                                       
Query: 305 gaattaaagaaactgcatccctttgaccctccaaacaggtttcctcctcctttgacaaga 364
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 292 gaattaaagaaactgcatccctttgaccctccaaacaggtttccttctcctttgacaaga 233

                                                                       
Query: 365 aatgaaagcagcaatccttgaagttgttgcagagaggcttccaggaaatacttcttgtat 424
           |||||||||||||||||||||||||||           |||||||||||||||| |||||
Sbjct: 232 aatgaaagcagcaatccttgaagttgt-----------ttccaggaaatacttcatgtat 184

                  
Query: 425 cctctca 431
           |||||||
Sbjct: 183 cctctca 177


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 826
Length adjustment: 9
Effective length of query: 422
Effective length of database: 817
Effective search space:   344774
Effective search space used:   344774
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)