Query= MSMg01no076_o10.b1 MSMg01no076_o10.b1 CHROMAT_FILE:
MSMg01no076_o10.b1 PHD_FILE: MSMg01no076_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:03 2005
(589 letters)
>mm_chr8_66351382_66352382
Length = 1001
Score = 990 bits (512), Expect = 0.0
Identities = 572/598 (95%), Gaps = 14/598 (2%)
Strand = Plus / Plus
Query: 5 ggaattctgagaataggacaaaaagtctttcccaggaagagcacattaatggtttgttca 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctgagaataggagaaaaagtctttcccaggaagagcacattaatggtttgttca 264
Query: 65 atactgaatagtaaaccccgaacacgtatatacacacaagtagtactatacagactgaaa 124
|||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||
Sbjct: 265 atactgaatagtaaaccctgaacgcgtatatacatgcaagtagtactatacagactgaaa 324
Query: 125 aggttatattttcgaatatatatgccaggaacaagaattaatggaaaaa-aaaccacttg 183
||||||||||||| |||||||||||||||||||| |||||| ||||||| ||||||||||
Sbjct: 325 aggttatattttcaaatatatatgccaggaacaataattaagggaaaaagaaaccacttg 384
Query: 184 taaagctttacttcataaaaatcatcgaaaaactgcaatggtatttgtcatcctatacgg 243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 385 taaagctttacttcataaaaatcattgaaaaactgcaatggtatttgtcatcctatacgg 444
Query: 244 tagcctgatgattaatgtgtaagcaggtggtct-----ttacattactaattacaccctg 298
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 tagcctgatgattaatgtgtaagcaggtggtctcttgattacattactaattacaccctg 504
Query: 299 gaaatgagagactgtcaacatccaacatagtctccatacagatcttagcaa------caa 352
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 505 gaaatgagagattgtcaacatccaacatagtctccatacagatcttagcaacaacaccaa 564
Query: 353 caccaacaacaaagttgcctgtctaatgaactgctctttgtggatataaaaatacatacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caccaacaacaaagttgcctgtctaatgaactgctctttgtggatataaaaatacatacc 624
Query: 413 tggaattagttcatatcctggtttatgttcatgaataaaaagcccacaaaaaattcacat 472
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggaattagttcatattctggtttatgttcatgaataaaaagcccacaaaaaattcacat 684
Query: 473 gtatagtgactttcatagccaggaggaaaagggtggtagacctcatattaaatatattgt 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtatagtgactttcatagccaggaggaaaagggtggtagacctcatattaaatatattgt 744
Query: 533 aagactctatgaaaagggaattcagtgggaaaaa-aaataaatctggattgtatcagt 589
|| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 745 aaaactctatgaaaagggaattcagtgg-aaaaataaataaatctggattgtatcagt 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 1001
Length adjustment: 10
Effective length of query: 579
Effective length of database: 991
Effective search space: 573789
Effective search space used: 573789
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_o10.g1 MSMg01no076_o10.g1 CHROMAT_FILE:
MSMg01no076_o10.g1 PHD_FILE: MSMg01no076_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:03 2005
(652 letters)
>mm_chr8_66525148_66526199
Length = 1052
Score = 1230 bits (636), Expect = 0.0
Identities = 648/652 (99%)
Strand = Plus / Minus
Query: 1 aagtcagacaacactgtatccaagaagggcttcaaagcacattttttctcaggtataagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aagtcagacaacactgtatccaagaagggcttcaaagcacattttttctcaggtataagt 646
Query: 61 gtgcacatgatgtatgtacaggagttctgtctttcagtgtgttcttttaactgctatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtgcacatgatgtatgtacaggagttctgtctttcagtgtgttcttttaactgctatcac 586
Query: 121 tccttttgtaagcggaaagcatgtggaatgcctatgctaggcttggcagctcagttaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tccttttgtaagcggaaagcatgtggaatgcctatgctaggcttggcagctcagttaatg 526
Query: 181 ccagtgttagtatataaattttataggtcccaatgaaatgctgtccttgaatattagctc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ccagtgttagtatataagttttataggtcccaatgaaatgctgtccttgaatattagctc 466
Query: 241 atatataaaatttaagtaaggcaaaggctcgtatgaggactagaatagtttcatgttctg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atatataaaattaaagtaaggcaaaggctcgtatgaggactagaatagtttcatgttctg 406
Query: 301 actattcactgcatgtgtgtggtaataatggcaccaggctttcccaaaatgggcagattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 actattcactgcatgtgtgtggtaataatggcaccaggctttcccaaaatgggcagattt 346
Query: 361 tccaaataacatttattgacttagtaaatgtgatttcatttgagcactaaatttgttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tccaaataacatttattgacttagtaaatgtgatttcatttgagcactaaatttgttttc 286
Query: 421 ctgttttatatttctttattaggttaggctaaaactaatgtcatattttctctagtttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctgttttatatttctttattaggttaggctaaaactaatgtcatattttctctagtttct 226
Query: 481 tcagaaatcattgtgctaagtatagaaatataatttttataaattacatttatataaagt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 acagaaatcattgtgctaagtatagaaatataatttttataaattacatttatataaagt 166
Query: 541 ttgtagctttccatagaaatatggaaatgtaatttacttatactttatataaatataaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ttgtagctttccatagaaatatggaaatgtaatttacttatactttatataaatataaca 106
Query: 601 ctatctaacatttaatggcttgtgactgtgagtatactttacaagtaattaa 652
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 105 ctatctaacatttaatggcttgtgactgtgagtatactttaaaagtaattaa 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
