Query= MSMg01no079_f02.b1 MSMg01no079_f02.b1 CHROMAT_FILE:
MSMg01no079_f02.b1 PHD_FILE: MSMg01no079_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:55 2005
(643 letters)
>mm_chr8_50033658_50034700
Length = 1043
Score = 857 bits (443), Expect = 0.0
Identities = 458/463 (98%), Gaps = 2/463 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatttactcaccaccataaaaacacccccctacacagtgtcctgtaattgttcc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggaattcatttactcagcaccataaaaacacccccctacacagtgtcctgtaattgttcc 597
Query: 64 ttataattaacatgcattccaagcacagagcaggccatactcgtgtgggcccttggctgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttataattaacatgcattccaagcacagagcaggccatactcgtgtgggcccttggctgg 537
Query: 124 ttttagatttggaaagcagagtaagttcgcactccgctatctttgctcttccttaaggcc 183
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 536 ttttagatttggaaagcagagtaagttcacactccgctatctttgctcttccttaaggcc 477
Query: 184 acagtcct-ttcttctttccctctaccctgccgttgttcccagatccccgcacccctatg 242
||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 476 acagt-ctgttcttctttccctctaccctgccgttgttcccagatccctgcacccctatg 418
Query: 243 gaagctaccctgcagcctccatctctgctccacctggtccaagaacaataagaagctccc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaagctaccctgcagcctccatctctgctccacctggtccaagaacaataagaagctccc 358
Query: 303 aacttaagaagcgaaggctgagaccttgttttggatgttctgttctatctaatagaaatc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aacttaagaagcgaaggctgagaccttgttttggatgttctgttctatctaatagaaatc 298
Query: 363 agctagttggtgcacatatgaaaatgaactttttcttggcccagaagaaatggcatttta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agctagttggtgcacatatgaaaatgaactttttcttggcccagaagaaatggcatttta 238
Query: 423 ttttacatgtatgaagtattaagttttcttaagaaagagaata 465
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttttacatgtatgaagtattaagttttcttaagaaagagaata 195
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_f02.g1 MSMg01no079_f02.g1 CHROMAT_FILE:
MSMg01no079_f02.g1 PHD_FILE: MSMg01no079_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:55 2005
(507 letters)
>mm_chr8_49889743_49890649
Length = 907
Score = 915 bits (473), Expect = 0.0
Identities = 500/511 (97%), Gaps = 4/511 (0%)
Strand = Plus / Plus
Query: 1 tagttccctctaaaatgtacttctagacttcagaaacttaatttcatccctggttatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagttccctctaaaatgtacttctagacttcagaaacttaatttcatccctggttatctg 260
Query: 61 caaattgatacctcttaaaagttgttaatgtgatttaaactgttcaagtttcactcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaattgatacctcttaaaagttgttaatgtgatttaaactgttcaagtttcactcaaca 320
Query: 121 ctcatcaagtcgatggatatttcgtctagtcagaacaaaggtgaggcctggcagacaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatcaagtcgatggatatttcgtctagtcagaacaaaggtgaggcctggcagacaatg 380
Query: 181 tcctctccacacgctcagtacccgtgttactacgcaacacaaagacaaattagccaaatg 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctctccacacgctcagtacccgggttactacgcaacacaaagacaaattagccaaatg 440
Query: 241 cttaactcaaattccatgcttttagtagtcactagttttttttaaaaatacattctctct 300
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 cttaactcaaattccatgcttttagtagtcactagttttttttttaaatacattctctct 500
Query: 301 ggttttgagacagggtttctctgcatagctctgactgtcctggaactccctctgtagacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggttttgagacagggtttctctgcatagctctgactgtcctggaactccctctgtagacc 560
Query: 361 aggctggccttgaatttttgagagatcgtcctgcctctacctcctgagtgctgggattaa 420
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 561 aggctggccttgaatttttgagagatcgtcctgcctctacctcctgagagcggggattaa 620
Query: 421 agctgtatacaattctgacgaaacaatcttaaagtaaaaaaaaaaaatt----aaatcaa 476
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 621 agctgtatacaattctgacaaaacaatcttaaagtaaaaaaaaaaaattttttaaatcaa 680
Query: 477 gtcatagatcataaagaaaattccttctcct 507
|||| ||||||||||||||||||||||||||
Sbjct: 681 gtcacagatcataaagaaaattccttctcct 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
