XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGGTGTCCCAATAAGGTAGAGAGTAAATGAGAAAGATACTGGACACAGA
CCTTTGGCATCCACATACATGCTCTTACATACATACCTCCAACACACACA
CACACACACACACACACACACACACACACACACACACCCTTAAAATGTGG
ACCTAAAGTGTTAATATTTAATTCTATTTCTTGGACCAGATGTGCTTCTA
TTTTCTATACCTTTTTATAGAAAGAAATGTAATGCCAGTGCCAATTTTGG
GTTGTGGGTTTGTCCAACAAGATCTGTGCCTTACATGTTTGCACGCATTA
TAGTCAGGAGAGGAGTATGTCTCTGATTAGTAGAATACTAGAAGATTAAT
GTTTCTTTTAAATTCTCACAGCCTCAACTTCTACTATGTGTTGAAAAGTG
TTTTTGATTGTGATTTTCCAATGATATAAATAACATATGAATATATTTCA
GTGCAATTTTTCAAACAAAATAATACTGACTACTATATAGTCTATTTTAC
CCAGTAAGAACATTTTCCCTGTATTACCTAAATTAATTCTTGGAAGTTTA
GGAATGTATAACATATATACCACTATTGTTTTATGAGAAACCTTGAGTTT
GTGTGCCTGAAAAGTAGCAGAACTGGTGTTTGAAGGAATGTGTTTGATCC
TAAAG

TAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCACAATATGTACTCACATGAAACTGAAGAAG
AACGAAGACCAAAGTATGGACACTGTGCCCCTTCTTAGAATTGGGAACAA
AACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGTGACAAAAG
GATGGACCATCTAGAGACTGCCATATCCATGGATCCATCCCATAATCAGC
TTCCAAACGCTGACATCATTGCATACACTAGCAAGATTTTGCTGAAAGGA
CCCAGATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACA
GAAGTGCATGCTCACAGTCAGCTATTGGATGGATCACAGGGCCCCTAATG
GAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATA
GGTGGAACAACACTATGAAGTAACCAGTACCCCAGAGCTCTTGACTCTAG
CTGCATATGTATCAAAAGATTGCCTAGTTGGCCATCACTGAAAAGAGAGG
CCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGG
CCAAAAAGTGGGGGTGGGTGGGTAGGAGGNTATGNTNNNTTTNNTNTTTT
TTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTTGTGTTTTGTT
TT

Query= MSMg01no079_m11.b1 MSMg01no079_m11.b1 CHROMAT_FILE:
MSMg01no079_m11.b1 PHD_FILE: MSMg01no079_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:30 2005
         (615 letters)



>mm_chr8_83606051_83607065
          Length = 1015

 Score = 1149 bits (594), Expect = 0.0
 Identities = 609/616 (98%), Gaps = 5/616 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctggtgtcc-caataaggtagagagtaaatgagaaagatactggacacagacctt 63
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gaattctggtgtcaacaataaggtagagagtaaatgagaaagatactggacacagacctt 259

                                                                       
Query: 64  tggcatccacatacatgctcttacatacatacctccaacacacacacacacacacacaca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggcatccacatacatgctcttacatacatacctccaacacacacacacacacacacaca 319

                                                                       
Query: 124 cacacacacacacacacacacac----ccttaaaatgtggacctaaagtgttaatattta 179
           |||||||||||||||||||||||    |||||||||||||||||||||||||||||||||
Sbjct: 320 cacacacacacacacacacacacacacccttaaaatgtggacctaaagtgttaatattta 379

                                                                       
Query: 180 attctatttcttggaccagatgtgcttctattttctatacctttttatagaaagaaatgt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attctatttcttggaccagatgtgcttctattttctatacctttttatagaaagaaatgt 439

                                                                       
Query: 240 aatgccagtgccaattttgggttgtgggtttgtccaacaagatctgtgccttacatgttt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatgccagtgccaattttgggttgtgggtttgtccaacaagatctgtgccttacatgttt 499

                                                                       
Query: 300 gcacgcattatagtcaggagaggagtatgtctctgattagtagaatactagaagattaat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 gcacgcattatagtcaggagaggagtatgtctctgattagtagaatactagaagattcat 559

                                                                       
Query: 360 gtttcttttaaattctcacagcctcaacttctactatgtgttgaaaagtgtttttgattg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtttcttttaaattctcacagcctcaacttctactatgtgttgaaaagtgtttttgattg 619

                                                                       
Query: 420 tgattttccaatgatataaataacatatgaatatatttcagtgcaatttttcaaacaaaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgattttccaatgatataaataacatatgaatatatttcagtgcaatttttcaaacaaaa 679

                                                                       
Query: 480 taatactgactactatatagtctattttacccagtaagaacattttccctgtattaccta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taatactgactactatatagtctattttacccagtaagaacattttccctgtattaccta 739

                                                                       
Query: 540 aattaattcttggaagtttaggaatgtataacatatataccactattgttttatgagaaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aattaattcttggaagtttaggaatgtataacatatataccactattgttttatgagaaa 799

                           
Query: 600 ccttgagtttgtgtgc 615
           ||||||||||||||||
Sbjct: 800 ccttgagtttgtgtgc 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)