MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-080M02
Chromosome	8 (Build37)
Map Location	96,446,938 - 96,447,347
singlet/doublet	singlet
Overlap gene	Gnao1
Upstream gene	Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22, AU018778, Ces1, 2310039D24Rik, Ces7
Downstream gene	Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3, Herpud1, EG434339, AI451557, Cpne2, 2310065K24Rik, Rspry1, Arl2bp, Pllp, Ccl22, Cx3cl1, 1700121C10Rik, Ccl17, Ciapin1, LOC664947, Coq9, Polr2c, Dok4, LOC100040942, Ccdc102a
Link	Open Mouse BAC browser

Click to get alignment info.

name	Slc6a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20538 MGI:1270850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG244595 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244595 MGI:3648919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC382044 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Es1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13884 MGI:95420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676523 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676523
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ces3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104158 MGI:2148202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Es22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13897 MGI:95432
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AU018778 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234564 MGI:2142687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ces1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12623 MGI:88378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310039D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75704 MGI:1922954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins

name	Ces7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67935 MGI:1915185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnao1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14681 MGI:95775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amfr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23802 MGI:1345634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68219 MGI:1915469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ogfod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270086 MGI:2442978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bbs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67378 MGI:2135267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mt4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17752 MGI:99692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17751 MGI:97173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17750 MGI:97172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17748 MGI:97171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup93 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71805 MGI:1919055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041555 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041555
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 mRNAs, 1639 ESTs, 10 Proteins

name	Slc12a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20497 MGI:108114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Herpud1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64209 MGI:1927406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434339 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434339 MGI:3646624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 148 ESTs, 10 Proteins

name	AI451557 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102084 MGI:2142553
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpne2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234577 MGI:2387578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310065K24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102122 MGI:1919637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rspry1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67610 MGI:1914860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arl2bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107566 MGI:1349429
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pllp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67801 MGI:1915051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccl22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20299 MGI:1306779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cx3cl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20312 MGI:1097153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700121C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67364 MGI:1914614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	Ccl17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20295 MGI:1329039
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ciapin1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109006 MGI:1922083
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664947 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Coq9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67914 MGI:1915164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polr2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20021 MGI:109299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dok4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114255 MGI:2148865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040942 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Ccdc102a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234582 MGI:2686927
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543742 GeneID:20538 MGI:1270850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 transcript_id : NM_009209.2

name	EG244595 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701457 GeneID:244595 MGI:3648919
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG244595 transcript_id : NM_001013764.1

name	LOC382044 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124487012 GeneID:382044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : liver carboxylesterase N-like transcript_id : NM_001081372.1

name	Es1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348402 GeneID:13884 MGI:95420
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : esterase 1 transcript_id : NM_007954.2

name	Ces3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553603 GeneID:104158 MGI:2148202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxylesterase 3 transcript_id : NM_053200.2

name	Es22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526803 GeneID:13897 MGI:95432
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : esterase 22 transcript_id : NM_133660.1

name	AU018778 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450338 GeneID:234564 MGI:2142687
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU018778 transcript_id : NM_144930.1

name	Ces1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370214 GeneID:12623 MGI:88378
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxylesterase 1 transcript_id : NM_021456.2

name	2310039D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259016 GeneID:75704 MGI:1922954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins product : RIKEN cDNA 2310039D24 gene transcript_id : XM_134476.6

name	Ces7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51556220 GeneID:67935 MGI:1915185
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxylesterase 7 transcript_id : NM_001003951.1

name	Gnao1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116325994 GeneID:14681 MGI:95775
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein, alpha o transcript_id : NM_010308.3

name	Amfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113205072 GeneID:23802 MGI:1345634
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : autocrine motility factor receptor transcript_id : NM_011787.2

name	Nudt21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109948297 GeneID:68219 MGI:1915469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleoside diphosphate linked moiety X)-type motif 21 transcript_id : NM_026623.3

name	Ogfod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34850071 GeneID:270086 MGI:2442978
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 2-oxoglutarate and iron-dependent oxygenase domain containing 1 transcript_id : NM_177767.3

name	Bbs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981061 GeneID:67378 MGI:2135267
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bardet-Biedl syndrome 2 homolog (human) transcript_id : NM_026116.2

name	Mt4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326447 GeneID:17752 MGI:99692
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metallothionein 4 transcript_id : NM_008631.2

name	Mt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305286 GeneID:17751 MGI:97173
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metallothionein 3 transcript_id : NM_013603.1

name	Mt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123701854 GeneID:17750 MGI:97172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metallothionein 2 transcript_id : NM_008630.2

name	Mt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328216 GeneID:17748 MGI:97171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metallothionein 1 transcript_id : NM_013602.2

name	Nup93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352587 GeneID:71805 MGI:1919055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 93 transcript_id : NM_172410.2

name	LOC100041555 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259020 GeneID:100041555
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 mRNAs, 1639 ESTs, 10 Proteins product : similar to QM protein transcript_id : XM_001477545.1

name	Slc12a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14547896 GeneID:20497 MGI:108114
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 12, member 3 transcript_id : NM_019415.1

name	Herpud1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11612514 GeneID:64209 MGI:1927406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 transcript_id : NM_022331.1

name	EG434339 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259022 GeneID:434339 MGI:3646624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 148 ESTs, 10 Proteins product : predicted gene, EG434339 transcript_id : XM_486145.4

name	AI451557 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384162 GeneID:102084 MGI:2142553
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI451557 transcript_id : NM_001033207.2

name	Cpne2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:25141333 GeneID:234577 MGI:2387578
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine II transcript_id : NM_153507.2

name	2310065K24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560082 GeneID:102122 MGI:1919637
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310065K24 gene transcript_id : NM_028221.2

name	Rspry1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386272 GeneID:67610 MGI:1914860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger and SPRY domain containing 1 transcript_id : NM_026274.3

name	Arl2bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18859590 GeneID:107566 MGI:1349429
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 2 binding protein transcript_id : NM_024191.1

name	Arl2bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360051 GeneID:107566 MGI:1349429
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 2 binding protein transcript_id : NM_024269.3

name	Pllp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382577 GeneID:67801 MGI:1915051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasma membrane proteolipid transcript_id : NM_026385.4

name	Ccl22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677878 GeneID:20299 MGI:1306779
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) ligand 22 transcript_id : NM_009137.1

name	Cx3cl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431260 GeneID:20312 MGI:1097153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X3-C motif) ligand 1 transcript_id : NM_009142.3

name	1700121C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259026 GeneID:67364 MGI:1914614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : RIKEN cDNA 1700121C10 gene transcript_id : XM_001477748.1

name	Ccl17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981506 GeneID:20295 MGI:1329039
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) ligand 17 transcript_id : NM_011332.2

name	Ciapin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129955 GeneID:109006 MGI:1922083
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytokine induced apoptosis inhibitor 1 transcript_id : NM_134141.4

name	LOC664947 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258981 GeneID:664947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to ribosomal protein L7a transcript_id : XM_001475485.1

name	Coq9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129840 GeneID:67914 MGI:1915164
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coenzyme Q9 homolog (yeast) transcript_id : NM_026452.2

name	Polr2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130554 GeneID:20021 MGI:109299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) II (DNA directed) polypeptide C transcript_id : NM_009090.4

name	Dok4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892638 GeneID:114255 MGI:2148865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : docking protein 4 transcript_id : NM_053246.2

name	LOC100040942 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258983 GeneID:100040942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100040942 transcript_id : XM_001475534.1

name	Ccdc102a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677622 GeneID:234582 MGI:2686927
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 102A transcript_id : NM_001033533.1

name	Slc6a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543743 CCDS:CCDS22525.1 GeneID:20538 MGI:1270850
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008504 - monoamine transporter activity [Evidence ISS]; GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0015844 - monoamine transport [Evidence ISS]; GO:0006836 - neurotransmitter transport [Evidence IDA]; GO:0048265 - response to pain [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : NE transporter; norepinephrine transporter product : solute carrier family 6 member 2 protein_id : NP_033235.2

name	EG244595 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701458 CCDS:CCDS22526.1 GeneID:244595 MGI:3648919
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC244595 protein_id : NP_001013786.1

name	LOC382044 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124487013 GeneID:382044
definition	codon_start : 1 product : liver carboxylesterase N-like protein_id : NP_001074841.1

name	Es1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679689 CCDS:CCDS22527.1 GeneID:13884 MGI:95420
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : esterase 1 protein_id : NP_031980.1

name	Ces3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117553604 CCDS:CCDS22528.1 GeneID:104158 MGI:2148202
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006637 - acyl-CoA metabolism [Evidence TAS]; GO:0009636 - response to toxin [Evidence TAS] codon_start : 1 product : carboxylesterase 3 protein_id : NP_444430.2

name	Es22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526804 CCDS:CCDS22529.1 GeneID:13897 MGI:95432
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 product : esterase 22 protein_id : NP_598421.1

name	AU018778 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450339 CCDS:CCDS22530.1 GeneID:234564 MGI:2142687
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC234564 protein_id : NP_659179.1

name	Ces1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946842 CCDS:CCDS22531.1 GeneID:12623 MGI:88378
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : carboxylesterase 1 protein_id : NP_067431.1

name	2310039D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259017 GeneID:75704 MGI:1922954
definition	codon_start : 1 product : hypothetical protein LOC75704 protein_id : XP_134476.6

name	Ces7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51556221 GeneID:67935 MGI:1915185
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : carboxylesterase-like urinary excreted protein product : carboxylesterase 7 protein_id : NP_001003951.1

name	Gnao1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754012 CCDS:CCDS22532.1 GeneID:14681 MGI:95775
definition	GO_component : GO:0005834 - heterotrimeric G-protein complex [Evidence TAS]; GO:0005624 - membrane fraction [Evidence TAS] GO_function : GO:0005525 - GTP binding [Evidence IMP]; GO:0003924 - GTPase activity [Evidence TAS]; GO:0019001 - guanyl nucleotide binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IMP]; GO:0007212 - dopamine receptor signaling pathway [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IMP] [Evidence TAS]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0008016 - regulation of heart contraction [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Go alpha product : guanine nucleotide binding protein, alpha o protein_id : NP_034438.1

name	Amfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113205073 CCDS:CCDS22533.1 GeneID:23802 MGI:1345634
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] [Evidence ISS]; GO:0004842 - ubiquitin-protein ligase activity [Evidence ISS] [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence TAS]; GO:0030433 - ER-associated protein catabolism [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : autocrine motility factor receptor protein_id : NP_035917.2

name	Nudt21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386106 GeneID:68219 MGI:1915469
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA]; GO:0042382 - paraspeckles [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA] GO_process : GO:0006379 - mRNA cleavage [Evidence ISS]; GO:0006397 - mRNA processing [Evidence ISS] [Evidence IEA] codon_start : 1 note : cleavage and polyadenylation specific factor 5, 25 kD subunit product : nudix (nucleoside diphosphate linked moiety X)-type motif 21 protein_id : NP_080899.1

name	Ogfod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34850072 CCDS:CCDS22535.1 GeneID:270086 MGI:2442978
definition	GO_function : GO:0016706 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA] codon_start : 1 product : 2-oxoglutarate and iron-dependent oxygenase domain containing 1 protein_id : NP_808435.2

name	Bbs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313344 GeneID:67378 MGI:2135267
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0030534 - adult behavior [Evidence IMP]; GO:0040015 - negative regulation of body size [Evidence IMP]; GO:0045494 - photoreceptor maintenance [Evidence IMP]; GO:0008104 - protein localization [Evidence IMP]; GO:0007288 - sperm axoneme assembly [Evidence IMP] codon_start : 1 product : Bardet-Biedl syndrome 2 homolog protein_id : NP_080392.1

name	Mt4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678942 GeneID:17752 MGI:99692
definition	GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006875 - metal ion homeostasis [Evidence IDA] codon_start : 1 note : metallothionein 4 (MGD\|MGI:99692 GB\|NM_008631, evidence: BLASTN, 100%, match=189); putative product : metallothionein 4 protein_id : NP_032657.1

name	Mt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305287 GeneID:17751 MGI:97173
definition	GO_component : GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0016209 - antioxidant activity [Evidence ISS]; GO:0005507 - copper ion binding [Evidence IEA] [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] [Evidence IDA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006875 - metal ion homeostasis [Evidence IDA] [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0050774 - negative regulation of dendrite morphogenesis [Evidence ISS]; GO:0050768 - negative regulation of neurogenesis [Evidence IDA]; GO:0019430 - removal of superoxide radicals [Evidence ISS]; GO:0001666 - response to hypoxia [Evidence ISS] codon_start : 1 product : metallothionein 3 protein_id : NP_038631.1

name	Mt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468863 GeneID:17750 MGI:97172
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence TAS] GO_process : GO:0007263 - nitric oxide mediated signal transduction [Evidence IMP]; GO:0006882 - zinc ion homeostasis [Evidence IMP] codon_start : 1 product : metallothionein 2 protein_id : NP_032656.1

name	Mt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305285 GeneID:17748 MGI:97171
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005764 - lysosome [Evidence IDA] GO_function : GO:0005507 - copper ion binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence TAS] GO_process : GO:0006875 - metal ion homeostasis [Evidence IDA]; GO:0007263 - nitric oxide mediated signal transduction [Evidence IMP]; GO:0006882 - zinc ion homeostasis [Evidence IMP] codon_start : 1 product : metallothionein 1 protein_id : NP_038630.1

name	LOC100041555 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259021 GeneID:100041555
definition	codon_start : 1 product : similar to QM protein protein_id : XP_001477595.1

name	Nup93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369533 CCDS:CCDS22540.1 GeneID:71805 MGI:1919055
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : nucleoporin 93 protein_id : NP_765998.1

name	Slc12a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14547897 GeneID:20497 MGI:108114
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0015377 - cation:chloride symporter activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 12, member 3 protein_id : NP_062288.1

name	Herpud1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11612515 CCDS:CCDS22541.1 GeneID:64209 MGI:1927406
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006950 - response to stress [Evidence IDA]; GO:0006986 - response to unfolded protein [Evidence IDA] codon_start : 1 product : homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 protein_id : NP_071726.1

name	EG434339 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259023 GeneID:434339 MGI:3646624
definition	codon_start : 1 product : similar to adaptor-related protein complex 3, sigma 1 subunit protein_id : XP_486145.2

name	AI451557 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677506 GeneID:102084 MGI:2142553
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC102084 protein_id : NP_001028379.1

name	Cpne2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943807 CCDS:CCDS22543.1 GeneID:234577 MGI:2387578
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : copine 2 product : copine II protein_id : NP_705727.1

name	2310065K24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560083 GeneID:102122 MGI:1919637
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : hypothetical protein LOC102122 protein_id : NP_082497.2

name	Rspry1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541973 CCDS:CCDS22544.1 GeneID:67610 MGI:1914860
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ring finger and SPRY domain containing 1 protein_id : NP_080550.2

name	Arl2bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18859591 CCDS:CCDS22545.1 GeneID:107566 MGI:1349429
definition	GO_component : GO:0005625 - soluble fraction [Evidence ISS] GO_function : GO:0005096 - GTPase activator activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0005083 - small GTPase regulator activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ADP-ribosylation factor-like 2; ADP-ribosylation-like 2 binding protein product : ADP-ribosylation factor-like 2 binding protein isoform 1 protein_id : NP_077153.1

name	Arl2bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30348958 GeneID:107566 MGI:1349429
definition	GO_component : GO:0005625 - soluble fraction [Evidence ISS] GO_function : GO:0005096 - GTPase activator activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0005083 - small GTPase regulator activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ADP-ribosylation factor-like 2; ADP-ribosylation-like 2 binding protein product : ADP-ribosylation factor-like 2 binding protein isoform 2 protein_id : NP_077231.1

name	Pllp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20279132 CCDS:CCDS22546.1 GeneID:67801 MGI:1915051
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transmembrane 4 superfamily member 11 product : plasmolipin protein_id : NP_080661.1

name	Ccl22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677879 GeneID:20299 MGI:1306779
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : small inducible cytokine subfamily A, member 22; small inducible cytokine subfamily A22; dendritic cell and B cell derived chemokine product : chemokine (C-C motif) ligand 22 protein_id : NP_033163.1

name	Cx3cl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982017 CCDS:CCDS22548.1 GeneID:20312 MGI:1097153
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : small inducible cytokine subfamily D, 1; fractalkine; neurotactin product : chemokine (C-X3-C motif) ligand 1 protein_id : NP_033168.2

name	1700121C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259027 GeneID:67364 MGI:1914614
definition	codon_start : 1 product : hypothetical protein LOC67364 protein_id : XP_001477798.1

name	Ccl17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7549785 GeneID:20295 MGI:1329039
definition	GO_function : GO:0008009 - chemokine activity [Evidence TAS]; GO:0005125 - cytokine activity [Evidence TAS] GO_process : GO:0006968 - cellular defense response [Evidence TAS]; GO:0006935 - chemotaxis [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 note : small inducible cytokine subfamily A17-like product : chemokine (C-C motif) ligand 17 protein_id : NP_035462.1

name	Ciapin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527376 CCDS:CCDS22549.1 GeneID:109006 MGI:1922083
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0030097 - hemopoiesis [Evidence IMP] codon_start : 1 product : cytokine induced apoptosis inhibitor 1 protein_id : NP_598902.1

name	LOC664947 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258982 GeneID:664947
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475535.1

name	Coq9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859690 CCDS:CCDS22550.1 GeneID:67914 MGI:1915164
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_process : GO:0006744 - ubiquinone biosynthesis [Evidence IEA] codon_start : 1 product : coenzyme Q9 homolog protein_id : NP_080728.1

name	Polr2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29336059 GeneID:20021 MGI:109299
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : RNA polymerase II 3 product : polymerase (RNA) II (DNA directed) polypeptide C protein_id : NP_033116.2

name	Dok4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716573 GeneID:114255 MGI:2148865
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005158 - insulin receptor binding [Evidence IEA]; GO:0005066 - transmembrane receptor protein tyrosine kinase signaling protein activity [Evidence IPI] GO_process : GO:0000165 - MAPKKK cascade [Evidence IDA]; GO:0007399 - nervous system development [Evidence IDA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IPI] codon_start : 1 note : downstream of tyrosine kinase 4 product : docking protein 4 protein_id : NP_444476.1

name	LOC100040942 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258984 GeneID:100040942
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475584.1

name	Ccdc102a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677623 CCDS:CCDS22551.1 GeneID:234582 MGI:2686927
definition	codon_start : 1 exception : mismatches in translation product : coiled-coil domain containing 102A protein_id : NP_001028705.1

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 9 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 8 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 7 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 6 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 5 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 4 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 3 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 2 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 1 pseudo : _no_value

clone name	MSMg01-469O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387J05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-146L18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326P14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198N01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-298N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096H10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-080M02.T7 (MSMg01no080_m02.b1)	MSMg01-080M02.TJ (MSMg01no080_m02.g1)
ACC	AG301516	AG301517
length	694	695
length of high quality (start - end)	503 (44 - 546)	460 (75 - 534)
definition	CHROMAT_FILE: MSMg01no080_m02.b1 PHD_FILE: MSMg01no080_m02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:29:45 2005	CHROMAT_FILE: MSMg01no080_m02.g1 PHD_FILE: MSMg01no080_m02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:29:45 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA TTCTCTAATCTGTCAGATTAGAACTGATGTCTTGAAATGTCTAGAGTCTT TCTAATCCATGAGCATGTTCTCACTTGGAGTTACAGTTCACCTGCAGGTT TGCACTTGGTGTGCATCCTTGTGTAGACAAATGTGTAATGGCATGTATGT CTCATTATAATAGCATACCTGGAATTTTCACTGTTCTAAATCTCCCTGTG CTCCCTCTATTCTAATCCCTCTCTCTCTCTAAGCCCTGAAGACCACTGGC CTTGTCACTGTGCTCATCGCTTGCTCTCCTGAAAGTCATAGAGTTGTAGG CACATGGGAATTGTGGCCTTTGCAGACTGACTTCATTCAGGTTTCCTTCA TCTCCTCTCAGGCTTTAGAAGTCCACTTACTGTTAGTGCAGAACAAGATT CCGTTATCTGAATTACCATAGATTTCTGCTTTTTCTTCTTTTATATACAT GGTTGGAAGTCTTCATTGCTTCCAAATTTTGGATTATTTTAATAGAGCAG TTATTAGCTGCTGTATATTTCTAAGTGCAGGTTTTATGGGAGACATGTTG CAAGCTTTTTTTTTCCTTTGCAAATACCACAGAACTCAATTGCTTCGCAT TCTGTTTCACCCAGATCCATACTACTTCAACTACTAACCCGTTA	ATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXAGCAGAGAACTTGGGCCTCTAAAACT CTAGGCAAAGGCACTGAGAATCAAAGAGATTCCAGACAGGGGCTCACAAA TGTCTGGGCTGAGAACCTCTGTTCCTCTCTGTTGAGGTGGCACCGAGTGT GGCCTCTACCCTCTGTGGGTTGTACCTACAGTCTATTCCCCTCCACCAGA ATGCCCACACTGGGCACCCTCTTGTATCCAATAAGTCAGACACATAGTAA GTGATAAACATTTGTTGAATGAATATGGTAAAGAAAGGTTGAAAAAAAAC ATTGAACCCGAGGATTAGGAGACTTTAGGTTCCCCTATCACATGTCTATG GAATGAAGGAACTGCACTAGACAGAGGCTGCAGCTTCTTTAGCTTAAGGC TTAATCCATTCATGCAGAGAAGATGCAGAGGAGAAGCTTAACACTATGAG AAACAGCAACCCTCAGGGATGGAGGGTGGTGGTCAGGAGGAGAGCAGAAG CCAAAGCAAGCCACTCTGGATTTAGTTATTTTGGAGCATCTCTGAAGTGA CTGTCCATCATCTTTATGCTGTTGCCCCTGTGCAAGTGTTTTAGGTATCT GACCGCCCGATTATTTGCCTGCTCCCGATTTTTTCCCTTTCTGCA
quality values	Open. Hide. 6 6 6 6 6 6 9 19 28 27 20 17 19 17 18 28 19 15 8 8 8 19 19 19 10 10 10 12 21 22 10 8 8 8 10 12 25 31 18 19 28 28 28 31 33 36 33 36 36 36 50 50 53 53 50 50 50 43 37 26 19 12 9 9 9 10 21 23 42 42 42 42 42 47 50 50 50 50 50 43 48 50 54 54 50 48 40 40 37 37 35 40 48 48 48 48 50 50 50 57 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 50 50 50 50 50 50 57 57 57 57 57 57 50 48 48 48 48 46 50 57 57 57 57 57 57 57 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 68 68 57 57 57 57 57 57 44 57 57 57 57 57 57 57 57 57 57 47 47 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 52 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 52 52 52 62 52 52 52 62 62 62 62 62 62 52 52 52 62 62 52 43 43 39 39 62 62 62 62 62 62 62 45 43 43 43 52 62 44 43 43 43 35 44 44 62 62 62 62 62 45 52 62 62 62 62 62 52 52 52 62 62 57 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 57 68 68 68 68 68 68 57 57 57 52 52 57 57 44 38 38 13 13 13 24 32 57 43 43 52 52 52 59 52 59 59 57 59 52 43 43 43 43 59 43 52 52 57 50 57 52 52 52 44 44 38 38 23 44 44 57 57 57 57 57 50 50 48 50 48 59 59 44 43 32 32 35 40 42 57 59 59 59 59 57 57 54 59 59 59 59 68 68 68 68 68 68 68 57 68 57 57 47 46 39 39 35 37 37 43 43 59 47 48 54 44 44 32 23 23 37 41 48 48 48 43 42 37 35 35 37 42 40 40 37 28 23 28 31 31 37 39 39 40 43 39 31 31 20 24 24 22 22 23 23 22 24 24 21 21 12 21 23 30 26 39 28 31 22 22 28 32 39 27 23 10 10 10 14 17 23 24 19 12 10 10 18 26 30 28 24 22 11 11 11 11 11 11 12 23 18 10 9 8 8 8 8 10 10 22 34 34 47 42 41 33 36 36 36 33 34 34 16 12 9 9 8 8 8 10 18 15 10 10 10 10 11 11 12 11 11 11 17 17 25 30 20 15 10 8 8 8 8 8 8 8 8 8 8 8 10 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 9 8 8 11 8 8 8 8 10 10 10 10 8 8 8 8	Open. Hide. 9 9 9 9 9 9 9 15 9 9 9 15 17 30 30 37 37 37 43 48 47 47 41 44 39 50 42 37 25 18 10 6 6 6 8 8 10 22 29 22 28 28 30 30 31 36 36 36 36 36 50 36 37 50 50 43 47 35 27 19 17 23 15 24 15 17 17 23 21 42 42 48 41 41 41 41 41 41 48 48 50 48 57 50 50 50 50 57 47 43 47 57 57 57 57 59 59 57 57 57 57 57 57 57 68 68 68 68 57 57 54 54 54 54 57 57 57 50 50 50 50 44 37 57 57 57 57 68 50 51 50 50 50 50 51 50 50 50 50 50 57 43 43 43 52 52 57 57 57 57 57 57 52 52 57 57 57 52 52 57 57 57 57 44 44 43 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 52 57 57 57 59 57 57 57 57 57 57 52 52 57 59 57 57 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 52 52 52 62 47 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 52 52 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 57 57 57 57 57 57 57 52 52 52 57 57 57 57 57 57 57 52 52 52 57 57 52 57 57 57 57 57 57 57 43 43 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 52 52 52 52 52 57 57 59 59 57 57 57 57 57 43 43 32 27 38 32 32 37 43 43 52 52 46 43 43 43 59 59 57 57 57 59 57 57 57 50 44 44 48 48 57 59 54 46 48 41 41 41 48 47 48 48 57 57 57 57 59 54 54 57 59 59 59 41 41 41 41 43 43 37 59 36 28 23 23 23 36 36 35 35 28 40 25 25 33 40 30 43 43 43 43 57 57 43 40 25 25 22 33 33 39 39 39 46 34 34 23 28 31 26 24 14 15 28 30 36 39 26 29 28 28 23 32 28 30 24 24 12 12 12 15 18 21 19 22 19 24 24 28 23 19 19 17 17 17 19 19 32 31 31 35 32 33 35 35 35 37 37 39 26 23 21 23 31 22 21 32 32 27 23 14 10 10 11 13 13 29 23 26 14 14 14 16 17 19 11 13 11 19 17 19 14 14 14 12 16 12 13 10 16 16 12 10 9 9 9 9 9 9 9 9 12 21 28 28 18 14 12 8 8 12 8 8 8 10 8 8 12 10 9 9 9 8 8 10 10 11 14 19 16 15 15 18 12 11 13 17 17 11 9 10 10 14 19 9 11 10 10 10 10 13 14 8 10 8 9 10 10 10 19 19 11 7 6 8 8 17 11 11 11 12 8 12 6 6 8 8 10 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no080_m02.g1 MSMg01no080_m02.g1 CHROMAT_FILE:
MSMg01no080_m02.g1 PHD_FILE: MSMg01no080_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:45 2005
         (460 letters)



>mm_chr8_96446938_96447797
          Length = 860

 Score =  756 bits (391), Expect = 0.0
 Identities = 406/411 (98%), Gaps = 1/411 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcagagaacttgggcctctaaaactctaggcaaaggcactgagaatcaaagagattcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agcagagaacttgggcctctaaaactctaggcaaaggcactgagaatcaaagagattcca 351

                                                                       
Query: 61  gacaggggctcacaaatgtctgggctgagaacctctgttcctctctgttgaggtggcacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| 
Sbjct: 350 gacaggggctcacaaatgtctgggctgagaacctctgttcctctctgttgacgtggcact 291

                                                                       
Query: 121 gagtgtggcctctaccctctgtgggttgtacctacagtctattcccctccaccagaatgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gagtgtggcctctaccctctgtgggttgtacctacagtctattcccctccaccagaatgc 231

                                                                       
Query: 181 ccacactgggcaccctcttgtatccaataagtcagacacatagtaagtgataaacatttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ccacactgggcaccctcttgtatccaataagtcagacacatagtaagtgataaacatttg 171

                                                                       
Query: 241 ttgaatgaatatggtaaagaaaggttgaaaaaaaacattgaacccgaggattaggagact 300
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 170 ttgaatgaatatggtaaagaaaggttg-aaaaaaacattgaacccgaggattaggagact 112

                                                                       
Query: 301 ttaggttcccctatcacatgtctatggaatgaaggaactgcactagacagaggctgcagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ttaggttcccctatcacatgtctatggaatgaaggaactgcactagacagaggctgcagc 52

                                                              
Query: 361 ttctttagcttaaggcttaatccattcatgcagagaagatgcagaggagaa 411
           ||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 51  ttctttagctcgaggcttaatccattcatgcagagaagatgcagaggagaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space:   382500
Effective search space used:   382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information