Query= MSMg01no080_m23.b1 MSMg01no080_m23.b1 CHROMAT_FILE:
MSMg01no080_m23.b1 PHD_FILE: MSMg01no080_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:49 2005
(579 letters)
>mm_chr8_33012497_33013478
Length = 982
Score = 1089 bits (563), Expect = 0.0
Identities = 577/582 (99%), Gaps = 3/582 (0%)
Strand = Plus / Plus
Query: 1 tccctttcaa-gacaaaaaa-taatgtttttctctgagaaacaa-gtcaaaacatcagca 57
|||||||||| || |||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tccctttcaaagaaaaaaaaataatgtttttctctgagaaacaaagtcaaaacatcagca 260
Query: 58 aatgaaacattaaaatactttggtgcaattaaatatgacaaaatatgacctcagagtata 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgaaacattaaaatactttggtgcaattaaatatgacaaaatatgacctcagagtata 320
Query: 118 tccagcttttataaacatagtgcacggcagttctaaaaatcccatatgagatagccgtga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagcttttataaacatagtgcacggcagttctaaaaatcccatatgagatagccgtga 380
Query: 178 accccagcaactccctcgtcagatcaatcaatgggatttcagtcccaagatgtcacaaga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accccagcaactccctcgtcagatcaatcaatgggatttcagtcccaagatgtcacaaga 440
Query: 238 tatcccatgatgtcccaagatgtctcatgatgtcccaagatgaccaccgtagtcctaata 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcccatgatgtcccaagatgtctcatgatgtcccaagatgaccaccgtagtcctaata 500
Query: 298 cttcactcgtgcacactcatctcaccattgtagactcacttgtgatctaacctgggttat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttcactcgtgcacactcatctcaccattgtagactcacttgtgatctaacctgggttat 560
Query: 358 ttctaagaattcagctagataatacaacttactaaccatgtctatgcatgcaatctgaac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctaagaattcagctagataatacaacttactaaccatgtctatgcatgcaatctgaac 620
Query: 418 agggaatcctagctgagacttctctaaggatccaatagttggaaatacaggatctagaca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agggaatcctagctgagacttctctaaggatccaatagttggaaatacaggatctagaca 680
Query: 478 gttacctttagtggagaccttacatttcatttattattaatctttatcatgtatgtgttt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttacctttagtggagaccttacatttcatttattattaatctttatcatgtatgtgttt 740
Query: 538 atccttatcatgatgtgtgtgtttggngaagatgtggcaaaa 579
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 atccttatcatgatgtgtgtgtttggggaagatgtggcaaaa 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 982
Length adjustment: 10
Effective length of query: 569
Effective length of database: 972
Effective search space: 553068
Effective search space used: 553068
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_m23.g1 MSMg01no080_m23.g1 CHROMAT_FILE:
MSMg01no080_m23.g1 PHD_FILE: MSMg01no080_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:50 2005
(447 letters)
>mm_chr8_33156517_33157363
Length = 847
Score = 864 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Minus
Query: 1 cttatgaagactaggctggcctctaacagagattcacctgcctcaatttcccaagtactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cttatgaagactaggctggcctctaacagagattcacctgcctcaatttcccaagtactg 679
Query: 61 agattacaggtacatgctacatcatctggctcttaagggaattgtttaggatttatgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 agattacaggtacatgctacatcatctggctcttaagggaattgtttaggatttatgcta 619
Query: 121 tactttcccatctttcaatttgatcttcccataggtaccaattggacagttaaagacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tactttcccatctttcaatttgatcttcccataggtaccaattggacagttaaagacagg 559
Query: 181 gagaactgaaagtcatttcaaatcaaacctaagatatcacctgccatctgatggtcatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gagaactgaaagtcatttcaaatcaaacctaagatatcacctgccatctgatggtcatta 499
Query: 241 agcttgttatgcctcaaaacaaataatggcttttatggggatatgagagagatctcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agcttgttatgcctcaaaacaaataatggcttttatggggatatgagagagatctcttca 439
Query: 301 aagaggatgtggaatgtccaatcctgtgatccaaagtcattcccaaagctagatagaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aagaggatgtggaatgtccaatcctgtgatccaaagtcattcccaaagctagatagaggt 379
Query: 361 tcagcaactgggaggccgaagcagggctattccatgtttaaagcctaggttgaactgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcagcaactgggaggccgaagcagggctattccatgtttaaagcctaggttgaactgtat 319
Query: 421 agtaagacattgcctcaagacagagtg 447
|||||||||||||||||||||||||||
Sbjct: 318 agtaagacattgcctcaagacagagtg 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
