TCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGGATTC
ACCCGTACCGAGGATATAAAGTTTGCAAGACCCAGGAGCCTCTCTTCCCA
ATGATGGCCGACTAGGCCATCTTCTAATACTATGCAGCTAGAGGCATGAG
CTCCGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAG
ACCCCTTTAGCTCCTTGGGTGCTTTCTCTAGCTCCTCCATTGGGGGCCCT
GTGTTCCATCCAATAGTTGACTGTGAGCATCCACTTCTGTGTTTGCCAAG
CCCCAGCGTAGCCCCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAA
ATCTTGCTGGTGTATGCAGTGGTGTCAGCGTTTGGAGGCTGATTATGGGA
TGGATCCCCGGGTATAGCTGTCTCTAGATGGTCCATCCTTTCGTCTCAGC
TCCAAACTTTGTCTCTGTAACTCCTTCCACGGGTGTTTTGTTCCCAGTTC
TAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCCTTCTTCTTGAGTTTC
ATGTGTTTTGCATAATAGATATAAATAAAAAAGAAACAAAAAAAAAAAAA
AGAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAGAAAAAAA
TAAAAAAGAAAAATAAAAAAAAAACAAATAAAAAAGAACAAAAAAAACAA
AACACAATAAAAAACACAACAAAN

NCAATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTACAGGAGTATGAGCATGCTTCAGGA
TCAACTGGAACTTTCCAAGTAGTATGAAGTATATTTCTGCAGGTTTTCGT
CCTGGTTCTCGGCCAGCAATGCGATCTCTTGAATTTGCAGCCAAGTGGCC
TGGACTCTTGGCACAAGCATGTGACAGATGGGAATGTGTTTGTCCTGCAT
CCTATGCTTGCCTAAAGACCCATTAACCCCAATACTCTCCTTCCATTTCT
CTACACACAAGCGTCTTCACTCTCTAACTCTAAAAGTGGAAGTGAGAGGA
AGGCATCATTTGGAGGGACTTGACATTTTCATATAAAGTCTTCCAAACAT
TAAAACTCAGTTCATCTCTGGAAAAGAACACACTCACCATTTTAACTTAC
AGCCCACCCTGGAGGTGTTTTCTCTAGGAAAAGAGCTACTTTAAAGCCAC
CTTCTAATGTATAAATAAATTGTTTTCTTAAACATTCACAGAACACATCA
GATAGCATACAAGGAAAGCTGATGGTGGAGCTTGCCTATAGTCTCAGTGC
TGAAGAGGCTGGTATGGGAGGATCATAACTGCAGGGCCAGTCTATGCTAC
ATGGGAGCGTAAGGTTGACCTAAAATTTTGTATAAGAAGACCTATGTACG
TATTTGATTGATTTACCCTTAGACAAA

Query= MSMg01no081_l20.g1 MSMg01no081_l20.g1 CHROMAT_FILE:
MSMg01no081_l20.g1 PHD_FILE: MSMg01no081_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:02 2005
         (461 letters)



>mm_chr8_63660491_63661350
          Length = 860

 Score =  845 bits (437), Expect = 0.0
 Identities = 455/461 (98%), Gaps = 1/461 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tacaggagtatgagcatgcttcaggatcaactggaactttccaagtagtatgaagtatat 60
           |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 660 tacaggagtatgagcatgcttcagaatcaactggaactttccaagtagtacgaagtatat 601

                                                                       
Query: 61  ttctgcaggttttcgtcctggttctcggccagcaatgcgatctcttgaatttgcagccaa 120
           |||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttctgcagctttttgtcttggttctcggccagcaatgcgatctcttgaatttgcagccaa 541

                                                                       
Query: 121 gtggcctggactcttggcacaagcatgtgacagatgggaatgtgtttgtcctgcatccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtggcctggactcttggcacaagcatgtgacagatgggaatgtgtttgtcctgcatccta 481

                                                                       
Query: 181 tgcttgcctaaagacccattaaccccaatactctccttccatttctctacacacaagcgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgcttgcctaaagacccattaaccccaatactctccttccatttctctacacacaagcgt 421

                                                                       
Query: 241 cttcactctctaactctaaaagtggaagtgagaggaaggcatcatttggagggacttgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cttcactctctaactctaaaagtggaagtgagaggaaggcatcatttggagggacttgac 361

                                                                       
Query: 301 attttcatataaagtcttccaaacattaaaactcagttcatctctggaaaagaacacact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 attttcatataaagtcttccaaacattaaaactcagttcatctctggaaaagaacacact 301

                                                                       
Query: 361 caccattttaacttacagcccaccctggaggtgttttctctaggaaaagagctactttaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 caccattttaacttacagcccaccctggaggtgttttctctaggaaaagagctactttaa 241

                                                    
Query: 421 agccaccttctaatgtataaataaattgttttcttaaacat 461
           ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 240 agcca-cttctaatgtataaataaattgttttcttaaacat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 860
Length adjustment: 10
Effective length of query: 451
Effective length of database: 850
Effective search space:   383350
Effective search space used:   383350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)