Query= MSMg01no081_o19.b1 MSMg01no081_o19.b1 CHROMAT_FILE:
MSMg01no081_o19.b1 PHD_FILE: MSMg01no081_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:17 2005
(598 letters)
>mm_chr8_43439599_43440597
Length = 999
Score = 1139 bits (589), Expect = 0.0
Identities = 595/597 (99%), Gaps = 1/597 (0%)
Strand = Plus / Plus
Query: 1 tactagggaagagtt-acagggcccttttcaggacataataaggatttttaaggcggtaa 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactagggaagagtttacagggcccttttcaggacataataaggatttttaaggcggtaa 260
Query: 60 acaggttacttgctaataattacaattaggggataaatttgtacctacacttcataagag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaggttacttgctaataattacaattaggggataaatttgtacctacacttcataagag 320
Query: 120 tacagcgtatgcaaaacacattgtgttatctttgcacaagcaactttcctcctgtcacca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacagcgtatgcaaaacacattgtgttatctttgcacaagcaactttcctcctgtcacca 380
Query: 180 aatttatagactgctcacataaggctagcatgacatttgactcgccaaattggagacgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatttatagactgctcacataaggctagcatgacatttgactcgccaaattggagacgct 440
Query: 240 cttgtacacttcctccttcaaggtcagcactcctgagaaacaccacaaaactccattaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgtacacttcctccttcaaggtcagcactcctgagaaacaccacaaaactccattaat 500
Query: 300 ttatgttttgaggaagaaaatgcttcatggtaacagtaaaaaggtattcagtaagttgac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatgttttgaggaagaaaatgcttcatggtaacagtaaaaaggtattcagtaagttgac 560
Query: 360 tgcctagaagagactttggtccgatcttcttccattgtctagagaacaaacagaagctta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcctagaagagactttggtccgatcttcttccattgtctagagaacaaacagaagctta 620
Query: 420 aacatgtatcccaactctttcaatgtggaaatttatataaaaatcacctaagccttttct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacatgtatcccaactctttcaatgtggaaatttatataaaaatcacctaagccttttct 680
Query: 480 actcttgctttaattctattacaaggagtctacctacagcccatgtggactacttttaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actcttgctttaattctattacaaggagtctacctacagcccatgtggactacttttaaa 740
Query: 540 ttccttacatggaaagaaaaatcttcaattaagtcattattcatgaaatatccttaa 596
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttccttaaatggaaagaaaaatcttcaattaagtcattattcatgaaatatccttaa 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space: 581532
Effective search space used: 581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_o19.g1 MSMg01no081_o19.g1 CHROMAT_FILE:
MSMg01no081_o19.g1 PHD_FILE: MSMg01no081_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:17 2005
(586 letters)
>mm_chr8_43584113_43585098
Length = 986
Score = 1118 bits (578), Expect = 0.0
Identities = 584/586 (99%)
Strand = Plus / Minus
Query: 1 tgctctgcagtggatacttgcctctgctttttcttcatcttgtatagcactctggtccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgctctgcagtggatacttgcctctgctttttcttcatcttgtatagcactctggtccaa 727
Query: 61 ccaccctcatagcattgattcttttctgcctctgagtttattctttttttctaagtactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ccaccctcatagcattgattcttttctgcctctgagtttattctttttttctaagtactg 667
Query: 121 agttcatttgtcttcctaagattagtgaacataaagcactgcttgtccctcaccattaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agttcatttgtcttcctaagattagtgaacataaagcactgcttgtccctcaccattaac 607
Query: 181 atatgaagaaactccccttaccactagaccccatgcatagtggaatgaatgaagagacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 atatgaagaaactccccttaccactagaccccatgcatagtggaatgaatgaagagacca 547
Query: 241 gaatagaaaacttgatatgaatcaaggacacatggtgaatgagtcccagaggcagaattc 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaatagaaaacaagatatgaatcaaggacacatggtgaatgagtcccagaggcagaattc 487
Query: 301 aaacctcaaagctcatgccattcatatctacagcactttacatccatgcaccatccggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaacctcaaagctcatgccattcatatctacagcactttacatccatgcaccatccggta 427
Query: 361 tgtagtgtcccttatgtaaatgctggctaaaataattggactcttaatcctgcatctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgtagtgtcccttatgtaaatgctggctaaaataattggactcttaatcctgcatctaaa 367
Query: 421 acaacactgaagtaaagatagtattgaaataatacaatattttgaaataacaccaaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acaacactgaagtaaagatagtattgaaataatacaatattttgaaataacaccaaaaag 307
Query: 481 cacccacaaatattcattcagtaaattccttaagaactcatggtttcctacattagatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cacccacaaatattcattcagtaaattccttaagaactcatggtttcctacattagatat 247
Query: 541 gcagctttaataaaattcttacattgtccttgggtattgatgtgtc 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcagctttaataaaattcttacattgtccttgggtattgatgtgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
