Query= MSMg01no082_o21.b1 MSMg01no082_o21.b1 CHROMAT_FILE:
MSMg01no082_o21.b1 PHD_FILE: MSMg01no082_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:31 2005
(497 letters)
>mm_chr8_66755928_66756824
Length = 897
Score = 832 bits (430), Expect = 0.0
Identities = 460/470 (97%)
Strand = Plus / Minus
Query: 4 ggaattccctttaatttgtgttgtgatcttggatgtaactatcaaactagaaaaggttac 63
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 470 ggaattccctttaatttgtgttgtgatcttggatctaactatcaaactagaaaaggttac 411
Query: 64 agatatttatgcattgatttccttttctttctgcttcttcattttgtttcttatatgtag 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agatacttatgcattgatttccttttctttctgcttcttcattttgtttcttatatgtag 351
Query: 124 ataacaatctgttaagcgcgtaaacagtctgttagtgattctttaccatttctagctagc 183
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 350 gtaacaatctgttaagcgcgtaaacagtctgctagtgattccttaccatttctagctagc 291
Query: 184 aaatgtaaatggtttctcaaataagctctccctatggctggaattagaagacgctgctaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 290 aaatgtaaatggtttctcaaataagctctccctatggctggaattagaagacactgctaa 231
Query: 244 ctctttctcaaggagttttacctcctctaaatttaattttaaaatataagcactttgact 303
|||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 230 ctctttctcaaggatttttacctcctccaaatttagttttaaaatataagcactttgact 171
Query: 304 tgtattcataaggaatttaccaactggcaagtggtagacctgttatgctaaaaagaatgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgtattcataaggaatttaccaactggcaagtggtagacctgttatgctaaaaagaatgt 111
Query: 364 ttgagtattttgatctggagtagagacagctgtttcaattacatggtgattcacaaaact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ttgagtattttgatctggagtagagacagctgtttcaattacatggtgattcacaaaact 51
Query: 424 ggaaaaacccgcaggaaatccagcctcacagaaagccttactgtatatca 473
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ggaaaaacccggaggaaatccagcctcacagaaagccttactgtatatca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_o21.g1 MSMg01no082_o21.g1 CHROMAT_FILE:
MSMg01no082_o21.g1 PHD_FILE: MSMg01no082_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:31 2005
(553 letters)
>mm_chr8_66641870_66642823
Length = 954
Score = 971 bits (502), Expect = 0.0
Identities = 539/554 (97%), Gaps = 7/554 (1%)
Strand = Plus / Plus
Query: 1 cttatatctttacaaaagtaatgtagcaaatatattaggcacattgataaaatatatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttatatctttacaaaagtaatgtagcaaatatattaggcacattgataaaatatatagt 260
Query: 61 tgtatacaaattaatttaatggcatatcaagttgctttagtatataaaataattcatctg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtatacaaattaatttaaaggcatatcaagttgctttagtatataaaataattcatctg 320
Query: 121 aacttttgctgagggaacataaatattaaatgaaatcacctacaactttgaaaaaa-gaa 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aacttttgctgagggaacataaatattaaatgaaatcacctacaactttgaaaaaaagaa 380
Query: 180 ccaaactgacaattaaatatatataatatatataaaacatataagtatattatatatttc 239
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaactgacaattaaatacata--atatatataaaacatataagtatattatatatttc 438
Query: 240 ttttaaaatacattatataattaatatgtattaatataaatagtataaatatattattta 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttttaaaatatattatataattaatatgtattaatataaatagtataaatatattattta 498
Query: 300 tttatttattatatattaaaatatatataataattctgaaagatctcatttttacaggat 359
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 499 tttatt----atatattaaaatatatatgataattctgaaagatctcatttttacaggat 554
Query: 360 agttatagtgtcatgaaaatagacaaaagtgaagagaagttgattttgtgaaaaatatag 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 555 agttatagtgtcatgaaaatagacaaaagtgaagagaagttgattttgtgagaaatatag 614
Query: 420 ccttgccttttatgatttgtacctcatggatatgaagatcacacatgaatggaagagagg 479
|||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||
Sbjct: 615 ccttgccttttatgatttgtgcctcatggatatgaagatcacacattaatgggagagagg 674
Query: 480 tctaacaagaagattaacacatgaagctgaagctgctccaagctgtatattgccatcagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tctaacaagaagattaacacatgaagctgaagctgctccaagctgtatattgccatcagt 734
Query: 540 atgaccatggttat 553
||||||||||||||
Sbjct: 735 atgaccatggttat 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 954
Length adjustment: 10
Effective length of query: 543
Effective length of database: 944
Effective search space: 512592
Effective search space used: 512592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
