Query= MSMg01no083_f04.b1 MSMg01no083_f04.b1 CHROMAT_FILE:
MSMg01no083_f04.b1 PHD_FILE: MSMg01no083_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:01 2005
(361 letters)
>mm_chr8_19754010_19754769
Length = 760
Score = 636 bits (329), Expect = 0.0
Identities = 350/357 (98%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 5 gaattcataaaatgacaacaaagtaaataatacaggctcctggaattaggtacagtcaac 64
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcataaaatgacaa-aaagtaagtaatacaggctcctggaattaggtacagtcaac 263
Query: 65 atggaagcaaccaatacttgtgtttctcttcttagatcgactgactttaagtgtgtgaat 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 264 atggaagcaaccaatacttgtgtttctcttcttaaatcgactgactttaagtgtgtgaat 323
Query: 125 gctttgcatgtgtattctttctgtgtcccatgtgtgtgtgtgtgtcccacagacatcaga 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctttgcatgtgtattcttcctgtgtcccatgtgtgtgtgtgtgtcccacagacatcaga 383
Query: 185 agaggttatttcatctcatggacttggtgttccagaattttgtgagcaaacggttatgta 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 agaggttatttcatctcatggacttggtgttccagaattttgtgagcaaacgtttatgta 443
Query: 245 ttacaaatcaaacccaggtgctatgcaagaacaaaacatgttaaaaactcctcaaccccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttacaaatcaaacccaggtgctatgcaagaacaaaacatgttaaaaactcctcaaccccc 503
Query: 305 ttttctagctcctacagtgaatatgtttgatatgaaaacgattaaaagaatcataag 361
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 504 ttttatagctcctacagtgaatatgtttgatatgaaaacgattaaaagtatcataag 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 760
Length adjustment: 9
Effective length of query: 352
Effective length of database: 751
Effective search space: 264352
Effective search space used: 264352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_f04.g1 MSMg01no083_f04.g1 CHROMAT_FILE:
MSMg01no083_f04.g1 PHD_FILE: MSMg01no083_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:01 2005
(319 letters)
>mm_chr8_71970528_71971246
Length = 719
Score = 540 bits (279), Expect = e-158
Identities = 312/327 (95%), Gaps = 8/327 (2%)
Strand = Plus / Plus
Query: 1 acttttcagcaattgactatgattgctgactgctctcctcccaccttttctcaagagaaa 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 201 acttttcagcaattgactatgattgctgactgctcagctcccaccttttctcaagaggaa 260
Query: 61 acatgaggaatacttagctcttaattaaaacacaaacaaaagtgcacacgcacgcaa--- 117
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 atatgaggaatacttagctcttaattaaaacacaaacaaaagtgcacacacacgcaaaca 320
Query: 118 ---acacacaaacac--acacacacacacacactaaaaagaattaaagacaagatcgggc 172
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacacacacaaacacaaacacacacacacacactaaaaagaattaaagacaagatcgggc 380
Query: 173 atgctcagggtggtttggctgtagacacttatggaagtctaaaaggaaggattccaggcc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgctcagggtggtttggctgtagacacttatggaagtctaaaaggaaggattccaggcc 440
Query: 233 tgaaggagataggaactccagagaatgaccaaccaccagaatcaaataacatgaaccctc 292
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tgaaggagataggaactccagaggatgaccaactaccagaatcaaataacatgaaccctc 500
Query: 293 agggcactcagagatggaacaatgaaa 319
|||||||||||||||||||||||||||
Sbjct: 501 agggcactcagagatggaacaatgaaa 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
