Query= MSMg01no084_j04.b1 MSMg01no084_j04.b1 CHROMAT_FILE:
MSMg01no084_j04.b1 PHD_FILE: MSMg01no084_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:38 2005
(595 letters)
>mm_chr8_108483901_108484896
Length = 996
Score = 1118 bits (578), Expect = 0.0
Identities = 590/594 (99%), Gaps = 1/594 (0%)
Strand = Plus / Minus
Query: 3 ggaattctttccctctctct-cacaggacagggtaaccacagagagaatagccctttcct 61
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ggaattctttccctctctttccacaggacagggtaaccacagagagaatagccctttcct 737
Query: 62 ttgccctttggacgcctccagaggaaatgactactatgaccggaacctggcactgtttga 121
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 736 ttgccctttggacgcctccagaggaaatgactactatgaccggaacttggcactgtttga 677
Query: 122 ggtatctaaggagccattcaggtgtggtcgtctggaaggggcttctccggacctctcagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ggtatctaaggagccattcaggtgtggtcgtctggaaggggcttctccggacctctcagc 617
Query: 182 taagcatcaggctggcttctcttccactcccgactgccctctctttgcagccatccaggc 241
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 616 taagcatcaggctggcttctcttccactcccaactgccctctctttgcagccatccaggc 557
Query: 242 tatggatctcatggccctttcaatacacttcaccttcccagacccccttgcaaccttacg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatggatctcatggccctttcaatacacttcaccttcccagacccccttgcaaccttacg 497
Query: 302 tctgtcctccagggccagtatcctttgccttccttgcagcccctcaccaaggtgaccact 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tctgtcctccagggccagtatcctttgccttccttgcagcccctcaccaaggtgaccact 437
Query: 362 tcctcctcccctccattcctagggcctctcccagcccatggctctgctgtggatagattc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcctcctcccctccattcctagggcctctcccagcccatggctctgctgtggatagattc 377
Query: 422 tttcctttctcctttcctattggctcttccagctgttaccctctggttacagaggcttgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttcctttctcctttcctattggctcttccagctgttaccctctggttacagaggcttgt 317
Query: 482 tttccctccagcctctgtcccactctgccctccatagctagagctgcagggaatgtgtct 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttccctccagcctctgtcccactctgccctccatagctagagctgcagggaatgtgtct 257
Query: 542 ctggaaagattcccatgtttgtgccttccaacgggaaatttccctttctggacc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ctggaaagattcccatgtttgtgccttccaacgggaaatttccctttctggacc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 996
Length adjustment: 10
Effective length of query: 585
Effective length of database: 986
Effective search space: 576810
Effective search space used: 576810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_j04.g1 MSMg01no084_j04.g1 CHROMAT_FILE:
MSMg01no084_j04.g1 PHD_FILE: MSMg01no084_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:38 2005
(335 letters)
>mm_chr8_108389859_108390592
Length = 734
Score = 613 bits (317), Expect = e-180
Identities = 329/333 (98%), Gaps = 2/333 (0%)
Strand = Plus / Plus
Query: 1 tcacc-catcaactctaaccctttaaagctttttgttttggggtttgttgttgttgtttg 59
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcaccacatcaactctaaccctttaaagctttttgttttggggtttgttgttgttgtttg 259
Query: 60 gttgttttttgtttttgagctgtattagccctggctgtcctggaacccaaagcagtctgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttgttttttgtttttgagctgtattagccctggctgtcctggaacccaaagcagtctgg 319
Query: 120 ccttgaacatacagagatccatgcatgcatcccatccctggcgctctcttaaccttttta 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 320 ccttgaacatacagagatccatgcatgcatcccatccctggcgctctcttaaccttttaa 379
Query: 180 agatgggtctcactaggttgtcccggctaccctttctcatcctccatccttggcctccag 239
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 agatgggtctcactaggttgtcccggctgccctttctcatcctccatccttggcctccag 439
Query: 240 gcctgtgctaccaattccaactgaatcccaaccttcatagaaacaggaaagcctgctgcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcctgtgctaccaattccaactgaatcccaaccttcatagaaacaggaaagcctgctgcc 499
Query: 300 tctggaaggatctgtatggggccgcatcacctg 332
||||||||||||||||| |||||||||||||||
Sbjct: 500 tctggaaggatctgtat-gggccgcatcacctg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 734
Length adjustment: 9
Effective length of query: 326
Effective length of database: 725
Effective search space: 236350
Effective search space used: 236350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
