Query= MSMg01no086_c07.b1 MSMg01no086_c07.b1 CHROMAT_FILE:
MSMg01no086_c07.b1 PHD_FILE: MSMg01no086_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:46 2005
(293 letters)
>mm_chr8_9142535_9143229
Length = 695
Score = 516 bits (267), Expect = e-151
Identities = 288/295 (97%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 1 gtaaatttcccgtggataacctgtgaattatccagggatctagcataatagctacctact 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaaatttcccgtgaataacctgtgaattatccagggatctagcataatagctacctact 260
Query: 61 gcttggttcaaagaaaaccaaaataacaacaacaaaaacaaaaactgccacaaactgaac 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctggttcaaagaaaaccaaaataacaacaacaaaaacaaaaactgccacaaactgaac 320
Query: 121 ccttaaatgtcacaattctcagggtttaagtataaacaacatttggttgggctttttctc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 ccttaaatgtcacaattctcagggtttaagtataaacaacatttagttgggctttttctc 380
Query: 181 ttgtcctcaagaaagtgagagaaacggggtttt-ggctcaacctgtgacagtggaggctt 239
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ttgtcctcaagaaagtgagagaaacggggtttttggctcaacctgtgacagtggaggctt 440
Query: 240 gtcatcctctcttggagtccctgttaggtttc-agtgctgtcctacacagttata 293
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 gtcatcctctcctggagtccctgttaggtttttagtgctgtcctacacagttata 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 695
Length adjustment: 9
Effective length of query: 284
Effective length of database: 686
Effective search space: 194824
Effective search space used: 194824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_c07.g1 MSMg01no086_c07.g1 CHROMAT_FILE:
MSMg01no086_c07.g1 PHD_FILE: MSMg01no086_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:46 2005
(443 letters)
>mm_chr8_9228727_9229569
Length = 843
Score = 808 bits (418), Expect = 0.0
Identities = 433/438 (98%)
Strand = Plus / Minus
Query: 1 catttccttagcgtgtgtctcctggttggacagccatgctccagtggagggcatgctcta 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 catttccttaacgtgtgtctcctggttggacagccatgctccagtggagggcatgctcta 723
Query: 61 ggggcaacagaaatcggacttaatttggttcattaaagaaaggacacaaagctgggtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggggcaacagaaatcggacttaatttggttcattaaagaaaggacacaaagctgggtggg 663
Query: 121 caggatatagaagtataggagaggagctagtagaagttatgatcacagtatattggcaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 662 caggatatagaagtataggagaggagctagtagaagttatgatcacagcatattggcaaa 603
Query: 181 attctcaagtaactagagagggagagacagggtagggaaggaatttcttactggcatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 attctcaagtaactagagagggagagacagggtagggaaggaatttcttactggcatttc 543
Query: 241 ttcaagtgccacttatctgatgtgagtggttttctgtgggaggtctctctaaacctccat 300
|||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 542 ttcaagtgccacatatctgatgtgagtggctttctgtgggaggtctctctaaacgtccat 483
Query: 301 aaccctgagaactgctggtatgcattgagcccttgactccatgtgccccttgctggatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaccctgagaactgctggtatgcattgagcccttgactccatgtgccccttgctggatgt 423
Query: 361 tactgagggacccattctgcccagaactattactgaaaggcagcagtgtggtaacccaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tactgagggacccattctgcccagaactattactgaaaggcagcagtgtggtaacccaga 363
Query: 421 ctgtgaaggagccccctc 438
||||||||||||||||||
Sbjct: 362 ctgtgaaggagccccctc 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
