Query= MSMg01no086_e18.b1 MSMg01no086_e18.b1 CHROMAT_FILE:
MSMg01no086_e18.b1 PHD_FILE: MSMg01no086_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:59 2005
(244 letters)
>mm_chr8_98398422_98399065
Length = 644
Score = 379 bits (196), Expect = e-110
Identities = 232/244 (95%)
Strand = Plus / Minus
Query: 1 gcttagcagataaagtgcttgctgcacaggcctgatgatttgggttcactctccagatcc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 459 gcttagcagataaagtgcttgctgcacaggcctgatgatttgggttcagtctccagatcc 400
Query: 61 cacaatgaaggctgaaggaaaaacaaacaagctccaaggcattgtcttctgtcttcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cacaatgaaggctgaaggaaaaacaaacaagctccaaggcattgtcttctgtcttcccca 340
Query: 121 cacacatatgcacacatgccatgccatgcatatgctgcatgcccatatacacagggcata 180
|||||||||||| ||||||||||||||| ||| | ||||||||||||||| |||||||
Sbjct: 339 cacacatatgcatgcatgccatgccatgcgtataccccatgcccatatacacggggcata 280
Query: 181 tacagtacaaataacaggtgctggaaagatggctctgtggtttagagtacttgttgctct 240
|||||||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||||
Sbjct: 279 tacagtacaagtaacaggtgctgggaagatggctctgtggcttatagtacttgttgctct 220
Query: 241 tcta 244
||||
Sbjct: 219 tcta 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_e18.g1 MSMg01no086_e18.g1 CHROMAT_FILE:
MSMg01no086_e18.g1 PHD_FILE: MSMg01no086_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:59 2005
(242 letters)
>mm_chr8_98325370_98326012
Length = 643
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 aagtcagcagggggtacctaatcccctcaccccaaaagacagaaggag-catagagttgc 59
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 201 aagtcagcagggggtacctaatcccctcaccccaaaagacagaagcaaacatagagttgc 260
Query: 60 atccctatgcccaggcggcctaaggcagtaaggctccagttgtaggctcagagactaaat 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 atccctatgcccaggcggcctaaggcagtaaggctccagttgtaggcccagagactaaat 320
Query: 120 cacaacaaggctatctcagagagaaggaagaaggaaaaggaaagccaagactgtaggtgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaacaaggctatctcagagagaaggaagaaggaaaaggaaagccaagactgtaggtgg 380
Query: 180 gggtggcacagcagttagggaagagtgcttctgctctaacaggactcagactcactgaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtggcacagcagttagggaagagtgcttctgctctaacaggactcagactcactgaca 440
Query: 240 ccc 242
|||
Sbjct: 441 ccc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
