Query= MSMg01no086_g18.b1 MSMg01no086_g18.b1 CHROMAT_FILE:
MSMg01no086_g18.b1 PHD_FILE: MSMg01no086_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:10 2005
(513 letters)
>mm_chr8_66842687_66843599
Length = 913
Score = 891 bits (461), Expect = 0.0
Identities = 495/515 (96%), Gaps = 17/515 (3%)
Strand = Plus / Plus
Query: 4 gaattcaaattgtttacc-----tagacagagacacgctgagcagtgagcgctgcactgg 58
||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcaaattgt----caaaaatagacagagacacgctgagcagtgagcgctgcactgg 258
Query: 59 gtggagaacctggtgcctgaggtaaggttctaatcccagatgaaccatggcgtcctaacg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtggagaacctggtgcctgaggtaaggttctaatcccagatgaaccatggcgtcctaacg 318
Query: 119 aagctaaaccagtgctctaggaaagcatgggagtgagagcggagagaacaaatagacatg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aagctaaaccagtgctctaggaaagcatgggagtgagagcggagagaacaaatagacatg 378
Query: 179 aaagaatgtcctaggaaagacagatgtccacagtagctatcaaagggtggttccaagtct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaagaatgtcctaggaaagacagatgtccacagtagctatcaaagggtggttccaagtct 438
Query: 239 tacatgtccttgctggtacaattcctttgaaaatcctgaaaccatgaaatgatataacag 298
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 439 tacatgtccttgctggtacaatttctttgaaaatcctgaaaccatgaaatgatataacag 498
Query: 299 aagttaacatcatggaaaattcaaagtagctccacgtagcttaactcgtgtttcctgggc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagttaacatcatggaaaattcaaagtagctccacgtagcttaactcgtgtttcctgggc 558
Query: 359 tttggctgtgctgcacttgggaagtagcagttagggctctgggttcagacaagattctgg 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 559 tttggctgtgctgcacttgggaagtagcagttagggctctgggttcagacaagatt-tg- 616
Query: 419 gttcagtccagataacaacaatgaaacccaaaacagttaaggtacattcgagaatcaata 478
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 617 ------tccagataacaacaatgaaacccaaaacagttaagatacattcgagaatcaata 670
Query: 479 ttgtttacatttcccatagtcaccagaatgatctg 513
|| ||||||||||||||||||||||||||||||||
Sbjct: 671 ttctttacatttcccatagtcaccagaatgatctg 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_g18.g1 MSMg01no086_g18.g1 CHROMAT_FILE:
MSMg01no086_g18.g1 PHD_FILE: MSMg01no086_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:10 2005
(395 letters)
>mm_chr8_66918296_66919092
Length = 797
Score = 646 bits (334), Expect = 0.0
Identities = 344/348 (98%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 50 aaaaattggtctgagaaactgattatttttttaaagaatttttaaaaatcttctaaattt 109
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 708 aaaaattggtctaagaaactgattatttttttaaagaattttttaaaatcttctaaattt 649
Query: 110 aagagatttttacattttaaaaatgtaaaagcttaatttaaaaaatatataggtatacat 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aagagatttttacattttaaaaatgtaaaagcttaatttaaaaaatatataggtatacat 589
Query: 170 atatgtatattgacaatgttaaaataaggtttaaatggatgttgtttgagtatttatttt 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atatgtatattgacaatgttaaaataaggtttaaatggatgttgtttgagtatttatttt 529
Query: 230 ataaacagtttaactaaaaagacagatcgcaaaaattcccag--tttttttttttacatt 287
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 528 ataaacagtttaactaaaaagacagatcgcaaaaattcccaggttttttttttttacatt 469
Query: 288 aagtctatttacagaattttcattgttaaagttatgacaatgatggcaaccagtagaaag 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aagtctatttacagaattttcattgttaaagttatgacaatgatggcaaccagtagaaag 409
Query: 348 agtgccatttatgtgctaaataaacttagtttctgagttattcaatgt 395
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agtgccatttatgtgctaaataaacttagtttctgagttattcaatgt 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 797
Length adjustment: 9
Effective length of query: 386
Effective length of database: 788
Effective search space: 304168
Effective search space used: 304168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
