NNNTTAAAANNTTTTTTNNTTTTNTATNTTNTTTTTANNNTNNNNNCAAT
GGTAANNNNCCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCTCTCCTGCTCTGAGACGACTATACACTTAGTCT
TGAAGCCTCACATTAGGGTTACACACTCCTCCGTTCTCCCAGTCCTGAGC
ACTGCCCACAGTTATGGTAAATGTATTCTTTACTTTTAGGGAAGCACTCC
TTTCTAATCCCCATCTGACGGTCCTAGATGAAACTTCTACCTTGTCACTC
ATTACAGAGAGGGAATTATATCTGGTGGTCTCCGAGGGTACCAGGATTCA
CTGACGGGTCTTCAAGTCCTTACTATGGATGTTATATATTTTTACACGGT
ACTCCTTTACCTTGTCATTCCCTTTTTTTTTTTTCTCCCCCCCCCCCCCC
CCTAATAAATCATATTTTTCTTTTTCTCCGTAATTATACCCCCCTATAAA
AAAAAAAATTTTCGTGTGTGTGGTGGTTTCTCTTTTTTAGTACTCCTTCT
CTTTTTTTCATTTTTCTACTTTATTTTTTTACCTCGCTCCTCTCGCTAGG
CTGGCAGTATCTTTACGTAATTTGATTCCTCTCTTTTTTAGCTTACAAGA
TCATTTCTCAAAAAATTAGAGTTGCAATCTTCTATGATTTTATCTTCCGT
TTACGTTTACCGCCCCCCCCGCCTTTTCTTTTCCACTGTCTTCATCGTCG
TTCTCCGGTTCTCTCGTTTTTCTATTATTTTTCTCGCCTATTCTCTTCAG
CTCTATTCTCGTGTTCTTTTGTTCTTTACTCTTTTTTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCATAAACAGAGAAAGAAGAGAGAGAGAGGCTCATTCACAAAAACA
CAGGAAAGAACATTTCCTCGAGAGGGTTAGATGAACAAAGGAGGGCTTAG
TAGAAATCCATTGCATCCGACATTGTAATCCACCAAATACTAATAAGGAA
GGAAGAAAACAAATATTAATAATCCGACCAACCAGAAAAAATAATAACCA
ACAAAGCCACAGGAAATAGCAAACTTCTGTCAATAATAACCTTAAATGAA
AATAACCTCTGCTTGCCATTTTAAAGAAGCAGATTAGATGGGTAGAATAA
AAAATATGACTCATTCATTTGTTGTTTCCAAGAAACACACTGCACTGGCA
AAGACATACACAGATTGAGAATCCAGGGATGGACATCAACTTACAGAGCA
AATAGAAACTAAAGGCGAGCTGTTTTAGCATCTGATTCCAGTTAAAAGAG
ATTTCAAACCAAAACTAGTGAGGAGAAAGTAAAGACAGGTACTACATATT
CACAAAGTGAAAAAAACCACCAAGAGCTTAGAAAAATTATAAATATTTAT
GTGCCAAATAGTAGAACTGCTAATTTATTATAATAAACACTAGAAGGCAG
AACAATTCAGACAGATCTTGCAATAATGGCACGTGATATCCGTGC

Query= MSMg01no086_i07.g1 MSMg01no086_i07.g1 CHROMAT_FILE:
MSMg01no086_i07.g1 PHD_FILE: MSMg01no086_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:18 2005
         (546 letters)



>mm_chr8_81989891_81990836
          Length = 946

 Score = 1040 bits (538), Expect = 0.0
 Identities = 544/546 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cataaacagagaaagaagagagagagaggctcattcacaaaaacacaggaaagaacattt 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 catacacagagaaagaagagagagagaggctcattcacaaaaacacaggaaagaacactt 260

                                                                       
Query: 61  cctcgagagggttagatgaacaaaggagggcttagtagaaatccattgcatccgacattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcgagagggttagatgaacaaaggagggcttagtagaaatccattgcatccgacattg 320

                                                                       
Query: 121 taatccaccaaatactaataaggaaggaagaaaacaaatattaataatccgaccaaccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatccaccaaatactaataaggaaggaagaaaacaaatattaataatccgaccaaccag 380

                                                                       
Query: 181 aaaaaataataaccaacaaagccacaggaaatagcaaacttctgtcaataataaccttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaataataaccaacaaagccacaggaaatagcaaacttctgtcaataataaccttaa 440

                                                                       
Query: 241 atgaaaataacctctgcttgccattttaaagaagcagattagatgggtagaataaaaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaaataacctctgcttgccattttaaagaagcagattagatgggtagaataaaaaat 500

                                                                       
Query: 301 atgactcattcatttgttgtttccaagaaacacactgcactggcaaagacatacacagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgactcattcatttgttgtttccaagaaacacactgcactggcaaagacatacacagat 560

                                                                       
Query: 361 tgagaatccagggatggacatcaacttacagagcaaatagaaactaaaggcgagctgttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagaatccagggatggacatcaacttacagagcaaatagaaactaaaggcgagctgttt 620

                                                                       
Query: 421 tagcatctgattccagttaaaagagatttcaaaccaaaactagtgaggagaaagtaaaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagcatctgattccagttaaaagagatttcaaaccaaaactagtgaggagaaagtaaaga 680

                                                                       
Query: 481 caggtactacatattcacaaagtgaaaaaaaccaccaagagcttagaaaaattataaata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caggtactacatattcacaaagtgaaaaaaaccaccaagagcttagaaaaattataaata 740

                 
Query: 541 tttatg 546
           ||||||
Sbjct: 741 tttatg 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)