Query= MSMg01no087_e22.b1 MSMg01no087_e22.b1 CHROMAT_FILE:
MSMg01no087_e22.b1 PHD_FILE: MSMg01no087_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:22 2005
(643 letters)
>mm_chr8_58974158_58975199
Length = 1042
Score = 698 bits (361), Expect = 0.0
Identities = 386/399 (96%), Gaps = 9/399 (2%)
Strand = Plus / Minus
Query: 2 tatatatagatatatttgggtttggttgacctcctgcctctgggttttctattttttttt 61
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 390 tatatatagatatatttggttttggttgacctcctgcctctgggttttcta-tttttttt 332
Query: 62 ccaaatatgattttaatttaaatagaattacatcactttccacttctcttcatctcttcc 121
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ccaaatatgattttaattgaaatagaattacatcactttccacttctcttcatctcttcc 272
Query: 122 caactattctccttcaaaccaaacccacacccctccattcttaattagcccctttatatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 caactattctccttcaaaccaaacccacacccctccattcttaattagcccctttatatt 212
Query: 182 ttatgtacattgtgatggtttgaatatgtttgtccttgggtttggcactataagtggatg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttatgtacattgtgatggtttgaatatgtttgtccttgggtttggcactataagtgga-- 154
Query: 242 tggccttgttggagtaggtgtggcattgttggaggaaatgtgtcattgtgagagtagcct 301
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 153 ------tgttggagtaggtgtggccttgttggaggaaatgtgtcattgtgagagtatcct 100
Query: 302 ggaagaccctcatcctagctccttgggaagccagcctttttctagtgaccttcaaatgaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ggaagaccctcatcctagctccttgggaagccagcctttttctagtgaccttcaaatgaa 40
Query: 362 gatgtagaactctcagctcctcctgcactatgcctgcct 400
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 gatgtagaactctcagctcctcctgcactatgcctgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space: 653256
Effective search space used: 653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_e22.g1 MSMg01no087_e22.g1 CHROMAT_FILE:
MSMg01no087_e22.g1 PHD_FILE: MSMg01no087_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:23 2005
(290 letters)
>mm_chr8_58822469_58823158
Length = 690
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Plus
Query: 1 tctgcactatcttaggaatttctgtagacagaattttaagttacactttcctatttttga 60
|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tctgcattatcttaggaatttctgtagacagaattttaagttacactttggtatttttga 260
Query: 61 ttacttatttaaatgaaaacttcctgcatttgtgtcgagaataagaacaagattgactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacttatttaaatgaaaacttcctgcatttgtgtcgagaataagaacaagattgactat 320
Query: 121 gtttgttggatctttacaccacaaaatgaacatgatctttcaggtacacctctctgtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgttggatctttacaccacaaaatgaacatgatctttcaggtacacctctctgtggg 380
Query: 181 gtttgcaaaagaagtttctaaattctggaatggaacttgattcatggcatctaataaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtttgcaaaagaagtttctaaattctggaatggaacttgattcatggcatctaataaaga 440
Query: 241 tattttactacccctgccaagttcagcagcaggcttgccagaacaca 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattttactacccctgccaagttcagcagcaggcttgccagaacaca 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
