Query= MSMg01no088_g16.b1 MSMg01no088_g16.b1 CHROMAT_FILE:
MSMg01no088_g16.b1 PHD_FILE: MSMg01no088_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:53 2005
(643 letters)
>mm_chr8_68412958_68414000
Length = 1043
Score = 1193 bits (617), Expect = 0.0
Identities = 623/625 (99%), Gaps = 1/625 (0%)
Strand = Plus / Plus
Query: 20 aaaaaaattactatgtcttttaaatgatccagtctaatgctgaaagggtatattataatg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaaaaaattactatgtcttttaaatgatccagtctaatgctgaaagggtatattataatg 278
Query: 80 aagttagggatatgactcaatcaaggtcacatgaatgagtatattcacaagagagaa-ta 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 279 aagttagggatatgactcaatcaaggtcacatgaatgagtatattcacaagagagaaata 338
Query: 139 cacttaacacctccaatgtggctttctctttgagtgtgtgtatgtatgtgtatggtacgc 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cacttaacacctccaatgtggctttctctttgagtgtgtgtatgtatgtgtatggtacgc 398
Query: 199 acacactgtgtgcagcgtgcaaggggatcagattagggtaatgcagttcattttcacatt 258
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 399 acacactgtgtgcagcgtgcaaggggttcagattagggtaatgcagttcattttcacatt 458
Query: 259 gtacctcattcttttgagacagtatctctccctgaatctggagcatttgctgtttgtgtc 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtacctcattcttttgagacagtatctctccctgaatctggagcatttgctgtttgtgtc 518
Query: 319 actattagcccaagcaatagctatagtactgtctctattactaccagcactgacttctaa 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 actattagcccaagcaatagctatagtactgtctctattactaccagcactgacttctaa 578
Query: 379 cccaccagggctaatattgttggtatggatgagactaagctcagactgctgcatgtatgc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cccaccagggctaatattgttggtatggatgagactaagctcagactgctgcatgtatgc 638
Query: 439 tgggatatgaactgtcttcctggtgacacagcaaaaactgatccatgtctccaaacttct 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tgggatatgaactgtcttcctggtgacacagcaaaaactgatccatgtctccaaacttct 698
Query: 499 aatgcattttaagttaatttttaaacttatgcataaaacatatattaatagatagccatg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aatgcattttaagttaatttttaaacttatgcataaaacatatattaatagatagccatg 758
Query: 559 agatattttgatatgcatgtatattgcttaatattcaaatcacattaagcttgtcaatct 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 agatattttgatatgcatgtatattgcttaatattcaaatcacattaagcttgtcaatct 818
Query: 619 ttagctttcatttttatgttgaatc 643
|||||||||||||||||||||||||
Sbjct: 819 ttagctttcatttttatgttgaatc 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_g16.g1 MSMg01no088_g16.g1 CHROMAT_FILE:
MSMg01no088_g16.g1 PHD_FILE: MSMg01no088_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:53 2005
(470 letters)
>mm_chr8_68551368_68552237
Length = 870
Score = 812 bits (420), Expect = 0.0
Identities = 426/428 (99%)
Strand = Plus / Minus
Query: 1 aaacaagctgtatgtaaatatattttaaatacttttatattaagatatcatgtacatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aaacaagctgtatgtaaatatattttaaatacttttatattaagatatcatgtacatgaa 372
Query: 61 gtagaaaaaattttaactgtctactttactaaatgtatacgtgtatacatgtatttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtagaaaaaattttaactgtctactttactaaatgtatacgtgtatacatgtatttttaa 312
Query: 121 gtgtgtactttactactcttagcataactacatataatgatttccatctaggtcaaggtt 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 311 gtgtgtactttactactcttagcataactgcatataatgatttccatctaggtcaaggtt 252
Query: 181 tagaacaaccagttaatatcactcataaaggtaaccattaatctttaaaatatttataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tagaacaaccagttaatatcactcataaaggtaaccattaatctttaaaatatttataca 192
Query: 241 ttcattttgtttgtgtttgagcgtcataggaaaggatcataaagttgacacaaattaatt 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttcattttgtttgtgtttgagcttcataggaaaggatcataaagttgacacaaattaatt 132
Query: 301 cctggattccttcactttaccacttgtgaaattcacccatatttttgtgtgaagttgtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cctggattccttcactttaccacttgtgaaattcacccatatttttgtgtgaagttgtag 72
Query: 361 tgattttaaatcggtcattatataaatttaatatgtaattgtccattaagttgttattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgattttaaatcggtcattatataaatttaatatgtaattgtccattaagttgttattat 12
Query: 421 attatttc 428
||||||||
Sbjct: 11 attatttc 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
