Query= MSMg01no091_k13.b1 MSMg01no091_k13.b1 CHROMAT_FILE:
MSMg01no091_k13.b1 PHD_FILE: MSMg01no091_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:15 2005
(480 letters)
>mm_chr8_23153846_23154725
Length = 880
Score = 920 bits (476), Expect = 0.0
Identities = 479/480 (99%)
Strand = Plus / Plus
Query: 1 cacacttgctgtcccaaacaactattttgtaagctgagaagcctgggccccaaaggcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacttgctgtcccaaacaactattttgtaagctgagaagcctgggccccaaaggcaga 260
Query: 61 tgggcagctcctgtttccatgagcccctaggacaaaagggccctgtttaggggagggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggcagctcctgtttccatgagcccctaggacaaaagggccctgtttaggggagggaca 320
Query: 121 cctggcaaagaaaacatttcagcactcagaaagattaccagctcaacccagaggagcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggcaaagaaaacatttcagcactcagaaagattaccagctcaacccagaggagcttt 380
Query: 181 cagtaggaatggcctccaagaaagaccctggggcgggccgggccagccctctgaggcaca 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtaggaagggcctccaagaaagaccctggggcgggccgggccagccctctgaggcaca 440
Query: 241 agaggaggctcagattctgtgacaggacaggaccagagaatctgacactaagctgtgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaggaggctcagattctgtgacaggacaggaccagagaatctgacactaagctgtgtgc 500
Query: 301 tggacacagacgcctggaagtttcccacactgagggtaaggttagcacaaacaccgcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggacacagacgcctggaagtttcccacactgagggtaaggttagcacaaacaccgcatt 560
Query: 361 caccgcagctaagggcccgacgctcatccatcatccacgacagaacgcaggtcactaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caccgcagctaagggcccgacgctcatccatcatccacgacagaacgcaggtcactaaga 620
Query: 421 gtgtaagctggatgttaaatgtacacgcggcacaagatcccagaaatctttctccagggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgtaagctggatgttaaatgtacacgcggcacaagatcccagaaatctttctccagggc 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_k13.g1 MSMg01no091_k13.g1 CHROMAT_FILE:
MSMg01no091_k13.g1 PHD_FILE: MSMg01no091_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:15 2005
(203 letters)
>mm_chr8_23253842_23254441
Length = 600
Score = 346 bits (179), Expect = e-100
Identities = 196/203 (96%), Gaps = 3/203 (1%)
Strand = Plus / Minus
Query: 1 ctttccaggagacaagctcgttctctagctgccccaggctttgttcttccccctctccca 60
||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||||
Sbjct: 400 ctttccaggagacaagctctttctctagctgccccaggctttggtctttcccttctccca 341
Query: 61 gcatgagagtgagggagtgccggctcctgggggggttttgttcccatagtttggtaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcatgagagtgagggagtgccggctcctgggggggttttgttcccatagtttggtaggca 281
Query: 121 aggagaagaacatacatacctctttaggatatcttcattcttcacaagatgaataaaaga 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 280 aggagaagaacatacatacctctttag---atcttcattcttcacaagatgaataaaaga 224
Query: 181 gtgagtggaatgctcgcacagtg 203
|||||||||||||||||||||||
Sbjct: 223 gtgagtggaatgctcgcacagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 600
Length adjustment: 8
Effective length of query: 195
Effective length of database: 592
Effective search space: 115440
Effective search space used: 115440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
