Query= MSMg01no091_k20.b1 MSMg01no091_k20.b1 CHROMAT_FILE:
MSMg01no091_k20.b1 PHD_FILE: MSMg01no091_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:16 2005
(451 letters)
>mm_chr8_24741719_24742570
Length = 852
Score = 781 bits (404), Expect = 0.0
Identities = 441/462 (95%), Gaps = 15/462 (3%)
Strand = Plus / Plus
Query: 1 atcagatgctcacataatgattcataacaatagcaaagttacagttaggaagtagcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 atcagatgctcacataatgattcataacaatagcaaagttacagttaggaagtagcaatg 246
Query: 61 aaaataattttactctcatggggtcaccatgatgtgagg--------------gtcacag 106
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 247 aaaataattttactctcatggggtcaccatgatgtgaggaactgtattaaagggtcacag 306
Query: 107 cattaggaaggtcgagaaccactgttttggtgtatttagatctaccctctgtaagtggtc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cattaggaaggtcgagaaccactgttttggtgtatttagatctaccctctgtaagtggtc 366
Query: 167 tctgattgactagttgcccttctctgtataaatacctagctttaggctctcttctctgat 226
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 367 tctgattgactagttgcccttctctgtagaaatacctatctttaggctctcttctctgat 426
Query: 227 actgtctgtgtttcccacaggaggctttaaagataccttttatgtggttaaatccacaca 286
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 actgtctgtgtttcccaaaggaggctttaaagataccttttatgtggttaaatccacaca 486
Query: 287 ata-cgaactcctcggcagaaaccattttcaaaggatatctctcagtggaacaaaggaca 345
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atagcgaactcctcggcagaaaccattttcaaaggatatctctcagtggaacaaaggaca 546
Query: 346 gtcacacttgctcaactaccacctccaatgaactccacctttgtcatccaacactgaaat 405
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 547 gtcacacttgctcaactaccacctccaatgacctccacctttgtcatccaacactgaaat 606
Query: 406 cccagattcactaataaaaagtctcaacctttctccaagttg 447
|||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 607 cccagattcactaaaaaaaagtcccaacctttctccaagttg 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_k20.g1 MSMg01no091_k20.g1 CHROMAT_FILE:
MSMg01no091_k20.g1 PHD_FILE: MSMg01no091_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:16 2005
(290 letters)
>mm_chr8_24848647_24849336
Length = 690
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Minus
Query: 1 tcatgaataatcagtgaggagaccggtgacagcaagtgtgacagtgaggtgacagcaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcatgaataatcagtgaggagaccggtgacagcaagtgtgacagtgaggtgacagcaagt 431
Query: 61 gtgtcgggctatcttaagtgctgtagaaggtgtggacatgggatcttttaacaagatagc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 430 gtgtcgggctatcttaagtgctgtagaaggtgtggacacgggatcttttaacaagatagc 371
Query: 121 ttgaaagctaagcattatcctacaaacccaacagtcctactcacaccattttactgggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgaaagctaagcattatcctacaaacccaacagtcctactcacaccattttactgggag 311
Query: 181 aaaaagatcttgctaatgtacaatgtagagcagcagggggaaaagatcttgcttgcttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aaaaagatcttgctaatgtacaatgtagagcagcagggggaaaagatcttgcttgcttat 251
Query: 241 tttatgtacaatgtggtgcaggtgaagtatgaggatggcacattcttcaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttatgtacaatgtggtgcaggtgaagtatgaggatggcacattcttcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
