Query= MSMg01no091_o16.b1 MSMg01no091_o16.b1 CHROMAT_FILE:
MSMg01no091_o16.b1 PHD_FILE: MSMg01no091_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:35 2005
(218 letters)
>mm_chr8_27737966_27738583
Length = 618
Score = 393 bits (203), Expect = e-114
Identities = 215/219 (98%), Gaps = 2/219 (0%)
Strand = Plus / Plus
Query: 1 aggcgagttgctagacagggagtaattaagatacttgggtaaatatgattaataagctca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 aggcgagttgctagacagggagtaattaagatacgtgggtaaatatgattaataagctca 260
Query: 61 aactggcgcggtgtgctgtaaacacgactaagcagatggtcccctctctgctgagaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactggcgcggtgtgctgtaaacacgactaagcagatggtcccctctctgctgagaaggc 320
Query: 121 tgggcacttgcaaacaaggagtgggtgagggagggctactcaagaggcatggctgttgg- 179
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 321 tgggcacttgcaaacaaggagtgggtgagggagggcgactcaagaggcatggctgt-ggc 379
Query: 180 tttcttgcctgagctgaccctgctggagagagcaaggga 218
|||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttcttgcctgagctgaccctgctggagagagcaaggga 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_o16.g1 MSMg01no091_o16.g1 CHROMAT_FILE:
MSMg01no091_o16.g1 PHD_FILE: MSMg01no091_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:35 2005
(229 letters)
>mm_chr8_27875135_27875763
Length = 629
Score = 412 bits (213), Expect = e-120
Identities = 225/229 (98%)
Strand = Plus / Minus
Query: 1 agtcttgacatgggggtatggctgctgaggtgttttctctcatttggctgattctggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agtcttgacatgggggtatggctgctgaggtgttttctctcatttggctgattctggagc 370
Query: 61 ctgggtagctttagtgaaactctccagaagtgtcctgatgaactctggatttcctgctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctgggtagctttagtgaaactctccagaagtgtcctgatgaactctggatttcctgctgc 310
Query: 121 attaggcttttcaaatttccagggtcaccgagcccctctgctgataccgtcttcaacacc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 309 attaggcttttcaaatttccagggtcaccgagcccctctgctgataccttcttcaacacc 250
Query: 181 ctctgcatctcccttgctcccacatgcagaccgtgtttaaactggagca 229
||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 249 ctctgcatctcccaggctcccacatgcaggccgtgtttaaactggagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
