Query= MSMg01no092_p15.b1 MSMg01no092_p15.b1 CHROMAT_FILE:
MSMg01no092_p15.b1 PHD_FILE: MSMg01no092_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:01 2005
(313 letters)
>mm_chr8_35274052_35274764
Length = 713
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Minus
Query: 1 gcagcagagtgctaggattataggtgtatgtcacctcaccaataacttgctatttaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcagcagagtgctaggattataggtgtatgtcacctcaccaataacttgctatttaaacc 454
Query: 61 tcagaggtgggtgacatgaatacacactaaatatcacataaatgtcatatgttgtatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcagaggtgggtgacatgaatacacactaaatatcacataaatgtcatatgttgtatgtt 394
Query: 121 accttccagaaacttacaatcaaattacagaggcaaaaaggtggcacatggaccaggaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 accttccagaaacttacaatcaaattacagaggcaaaaaggtggcacatggaccaggaag 334
Query: 181 gagagcagagtgatctgtaatggggagaaatctaataatacaggctgcaagtcagagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gagagcagagtgatctgtaatggggagaaatctaataatacaggctgcaagtcagagttc 274
Query: 241 tttagcaaagcccccaaagaacattaacaacacagatcccttagcctcgttcccaagtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tttagcaaagcccccaaagaacattaacaacacagatcccttagcctcgttcccaagtag 214
Query: 301 ttttattactagg 313
|||||||||||||
Sbjct: 213 ttttattactagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_p15.g1 MSMg01no092_p15.g1 CHROMAT_FILE:
MSMg01no092_p15.g1 PHD_FILE: MSMg01no092_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:01 2005
(417 letters)
>mm_chr8_35117978_35118793
Length = 816
Score = 775 bits (401), Expect = 0.0
Identities = 413/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 1 tcacatgatattcatgtgagggctaaatactggagtcagagtcagaacagcactgtggga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tcacatgatattcatgtgagggctaaatactggagtcagagtcagaa-agcactgtggga 259
Query: 61 ctgtgggtgagaatgctaatgagtagagccaacatggaaactagtactgaggggtcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctgtgggtgagaatgctaatgagtagagccaacatggaaactagtactgaggggtcctca 319
Query: 121 aaagacaaaaactgatgattatatgacccataactgaattataaaaccaacctgggtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaagacaaaaactgatgattatatgacccataactgaattataaaaccaacctgggtgct 379
Query: 181 tgtggcatatccacacaatgaggtttcattcagttgtaaagaattaagttgaaaaattag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtggcatatccacacaatgaggtttcattcagttgtaaagaattaagttgaaaaattag 439
Query: 241 ggagctggagagatagctaggcagttaagaacacttgcttctttttcagagatcctgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggagctggagagatagctaggcagttaagaacacttgcttctttttcagagatcctgggt 499
Query: 301 ttgattctcagcacccatgtggtaattcccaagtgtctctaaccccacggttccagagga 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 ttgattctcagcacccatgtggtaattcccaagtgtctctaatcccacggttccagagga 559
Query: 361 tctgatggtctcttctgacctctgaaggcaacaagcatgcatgtagcgtgtgtctga 417
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 tctgatggcctcttctgacctctgaaggcaacaagcatgcatgtagtgtgtgtctga 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 816
Length adjustment: 9
Effective length of query: 408
Effective length of database: 807
Effective search space: 329256
Effective search space used: 329256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
