Query= MSMg01no093_f21.b1 MSMg01no093_f21.b1 CHROMAT_FILE:
MSMg01no093_f21.b1 PHD_FILE: MSMg01no093_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:53 2005
(244 letters)
>mm_chr8_83257549_83258192
Length = 644
Score = 422 bits (218), Expect = e-122
Identities = 238/246 (96%), Gaps = 4/246 (1%)
Strand = Plus / Minus
Query: 1 agaatattttctgtcgtgcccctttgcaccct--atccttcttgcccttagcccattacc 58
|||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 444 agaatattttctgttgtgcccctttgca--gtaaatccttcttgcccttagcccattacc 387
Query: 59 ccatcactaactagcactaaatgttttcatttctattcaaatctatgcttgtcttggcta 118
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccatcactaactagaactaaatgttttcatttctattcaaatctatgcttgtcttggcta 327
Query: 119 tgctttagagagtcacccaagtagcatgtttcaggagtttacttgattcttgagtttgtc 178
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgctttggagagtcacccaagtagcatgtttcaggagtttacttgattcttgagtttgtc 267
Query: 179 atgcagacatgttgaaattgattcttaaagtttgataaaatgtgtcttaaattttgcagc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgcagacatgttgaaattgattcttaaagtttgataaaatgtgtcttaaattttgcagc 207
Query: 239 aaactg 244
||||||
Sbjct: 206 aaactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_f21.g1 MSMg01no093_f21.g1 CHROMAT_FILE:
MSMg01no093_f21.g1 PHD_FILE: MSMg01no093_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:54 2005
(324 letters)
>mm_chr8_83147407_83148130
Length = 724
Score = 528 bits (273), Expect = e-154
Identities = 314/335 (93%), Gaps = 14/335 (4%)
Strand = Plus / Plus
Query: 1 actcagaggagtgaatccctgcagaactgtggattaggcatatgtctctggtgatctggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 actcagaggagtgaatccctgcagaactgtggattaggcatatgtctctggtgatctggg 248
Query: 61 cagcc------------at-ctgggcaagatgtctacaaatctgtaattttatgaaaccc 107
||| | || |||| |||||||||||||||||||||||||||||||||||
Sbjct: 249 cagtcttaaggaagaaaatactgg-caagatgtctacaaatctgtaattttatgaaaccc 307
Query: 108 acaaggttggtactgtgaacgcttccagttcacagactctgacacttccaggtcccagct 167
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acaaggttggtactgtgaatgcttccagttcacagactctgacacttccaggtcccagct 367
Query: 168 aaattctgtagaaatatatgagctagtttttgatgacctgaggtttgagaactgcttgtt 227
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 368 aaattctgtagaaatatatgagctattttttgatgacctgaggtttgagaactgcttgtt 427
Query: 228 gtcacagcatgaacatacatgctcatgaacataacactatgctacgctacagttactgta 287
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gtcacagcatgaacatacatgttcatgaacataacactatgctacgctacagttactgta 487
Query: 288 taactaatcaccacaaatgcagtggcttcagcaac 322
|||||| |||||||||| |||||||||||||||||
Sbjct: 488 taactagtcaccacaaacgcagtggcttcagcaac 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
