Query= MSMg01no095_a14.b1 MSMg01no095_a14.b1 CHROMAT_FILE:
MSMg01no095_a14.b1 PHD_FILE: MSMg01no095_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:55 2005
(626 letters)
>mm_chr8_27185915_27186940
Length = 1026
Score = 1123 bits (581), Expect = 0.0
Identities = 616/633 (97%), Gaps = 11/633 (1%)
Strand = Plus / Plus
Query: 5 gaattccagcagcagcagcagtaaacggaaaatgaaattccttttttg-aaaatgacata 63
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 194 gaattccagcagcagcagcagtaaacggaaaatgaaattccttttttgaaaaatgacata 253
Query: 64 acaaaacccattaccttgtgtgttaacttttaataaggaacaaacatgcacatcagtgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 acaaaacccattaccttgtgtgttaacttttaataaggaacaaacatgcacatcagtgtt 313
Query: 124 accccaaattaatgac-agtgtgtgtgccctccccgtgtatcttagacttacagagtgag 182
|||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 314 accccaaattaatgacaagtgtgtgtgccctccccatgtatcttagactcacagagtgag 373
Query: 183 agaggttgggaagcaaggcacagaattctagtcataaaagcagtgcagagcggactcaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agaggttgggaagcaaggcacagaattctagtcataaaagcagtgcagagcggactcaaa 433
Query: 243 tgccgcagtgcttatgttctgtgcggaggacagagggaaggatggttagaaatatgaaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgccgcagtgcttatgttctgtgcggaggacagagggaaggatggttagaaatatgaaga 493
Query: 303 tgctacattgagagatctttcgatttccgccatcacactactgagaatattaaaatttat 362
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 494 tgctacattgagagatctttcgatttcagccatcacactactgagaatattaaaatttat 553
Query: 363 aagacacctcttgagtaataaaaagtagtacccatgtagaagaaaaattcctaataacat 422
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 554 aagacacctcttgagtaataaaaagtagtacccatgtagaagaaaaattccaaataacat 613
Query: 423 aataaaagcttttcggtcacaagaaacaattaatttgaaaa---------atgtgggaat 473
|||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 614 aataaaagcttttcggtcacaagaaacaatcaatttgaaaattttgaattatgtgggaat 673
Query: 474 taggtaagtatactaggcaggacccagaggagtccaagtaaaaaaggcaaatacagcaaa 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 taggtaagtatactaggcaggacccagaggagtccaagtaaaaaaggcaaatacagcaaa 733
Query: 534 tgatgcaatttgtgacagactgcaggggaccagcctcggctgagggcaggtctgaagaaa 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tgatgcaatttgtgacagactgcaggggaccagcctcggctgagggcaggtctgaagaag 793
Query: 594 ggtggatacaggagtggcaaagggaaggaagga 626
|||||||||||||||||||||||||||||||||
Sbjct: 794 ggtggatacaggagtggcaaagggaaggaagga 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_a14.g1 MSMg01no095_a14.g1 CHROMAT_FILE:
MSMg01no095_a14.g1 PHD_FILE: MSMg01no095_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:56 2005
(189 letters)
>mm_chr8_27347230_27347818
Length = 589
Score = 348 bits (180), Expect = e-100
Identities = 186/188 (98%)
Strand = Plus / Minus
Query: 1 ggtcttggtgggtgatgcagttattgagctaaagcttccctactgatttgtctttaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ggtcttggtgggtgatgcagttattgagctaaagcttccctactgatttgtctttaaaac 329
Query: 61 atactttccagatgtctgcgacatttctcctgaataatcattagtatcttgttgagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 328 atactttccagatgtctgcgacatttctcctgaataatcattagtatcttgctgagaatt 269
Query: 121 gaaatttggatgaggttggatgataagacaaagaagaatgagattagaggattagaagag 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 268 gaaatttggatgaggttggatgatgagacaaagaagaatgagattagaggattagaagag 209
Query: 181 catgtgtg 188
||||||||
Sbjct: 208 catgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
