Query= MSMg01no095_d21.b1 MSMg01no095_d21.b1 CHROMAT_FILE:
MSMg01no095_d21.b1 PHD_FILE: MSMg01no095_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:12 2005
(287 letters)
>mm_chr8_10005115_10005801
Length = 687
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Minus
Query: 1 gagacaggaggattgtgggttcagggttagcctgggctccagagcaaaacccggcttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gagacaggaggattgtgggttcagggttagcctgggctccagagcaaaacccggcttcaa 497
Query: 61 aatcaagcacatatctcaggtatgtgttattaccaaatcacatacagaaattaaatgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aatcaagcacatatctcaggtatgtgttattaccaaatcacatacagaaattaaatgact 437
Query: 121 cgaagaagtgcaagaccaaaggacggcaccttcttcctgttctgtataattatccagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cgaagaagtgcaagaccaaaggacggcaccttcttcctgttctgtataattatccagagg 377
Query: 181 gaattatctagctgggctataagatgccctttgccttctctgctctataaggcaaagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaattatctagctgggctataagatgccctttgccttctctgctctataaggcaaagaac 317
Query: 241 ttcatggcctttctcctcaacttaaagcccagaccaatctgagtcca 287
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 316 ttcatggccaaactcctcaacttaaagcccagaccaatctgagtcca 270
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no095_d21.g1 MSMg01no095_d21.g1 CHROMAT_FILE:
MSMg01no095_d21.g1 PHD_FILE: MSMg01no095_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:12 2005
(281 letters)
>mm_chr8_9940530_9941210
Length = 681
Score = 503 bits (260), Expect = e-147
Identities = 275/280 (98%)
Strand = Plus / Plus
Query: 1 tgtctggaatttctgtttaaatggtggcatggatttgcccaaaaataggtctcctagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtctggaatttctgtttaaatggtggcatggatttgcccaaaaataggtctcctagctt 260
Query: 61 ttgggtttggtttcacctatgtcattaagtagtgacttgtgttgctcatctcggagtaac 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgggtttggtttcacctaagtcattaagtagtgacttgtgttgctcatctcggagtaac 320
Query: 121 agcctgaatacccctaacttcctcgtagtaatctgcgaacactcagaaccagtgtcaatt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 agcctgaatacccctaacttcctcgtagtaatctgcaaacactcagaaccagtgtcaatt 380
Query: 181 caccatcacctactggtttatttcagataagtaaaaggatgctggtttggctgcttggcc 240
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 381 caccatcacctactggtttatttcagacaagtcaaaggatgctggtttggctgcttggcc 440
Query: 241 ccatccacatccagaattatgcgatactcatccaaaagac 280
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ccatccacatccagaattatgcgatactcatcctaaagac 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
