CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCCCCCCACCCCCACCCCCCCACTAAAGAGAGAGAGACAGAGACAG
AGAAAGAGAAAGAGAGAGAGAGAGAGAAGGAGAGAAAGACAGAGACAGAG
AGGAGTTAACATCATAAATCACATGTATCTAGCACATATCTGCAGTACAT
TACAGCTAAACACAAAAGAATATACTTTCTTCTCAGTGGCCTGCATACTA
GGACACATATCAAGTCTCGGCAGCTATAAAAATATTGAAGTAACACCCTG
CATCCTACGTGACCACCATGAATTAAAGCTGGATATGAACAACAGAAATA
GCAGGGAGCATGCAAACTCATGGAAACTGATCAAGGCAGAGATCAAGAAG
GAAATTACAGATGTTTGAGAATTGAATGAAAATGAAAACAAAACGTACCC
AATCCTATGAGATACAAGGAAGGCAGTTTTAAGAGACAAGTTCATAGCAC
TAAGTGCCTTAAGCAGCACCAGCAGCACCAGCAGCAGCAGCACCAGCAAA
CTACTACCACCACCACCAATCCATACTGGAGTTACCTATGTTATTAATTT
AGCAACACACCTGAAAACTCTAGAGCTGCAGTTGTCAACCTTCCTAATGC
TGTGACCCTTTAGCACAGTTCTTCATGTGTGGAGACCTCTCAACCATAAA
ATTATT

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCAATGACTAATGTTTTTGGTACTGTGCCT
TTTCTTGCCCTGTCTTCAGCAAGTCTTTGTCCTTGCATTCATGAGTGCCT
TTTACAAGCACTATGCAATTGGGGTTTTATACTAATTTTCGTATTTTCTC
TACCTTTTAAGTATGAAGGGGTTTTTTGTTTGTTTGTTTGTTTTTGTTTT
TGTTTTAATGATTTATTTATTTTATGTATATGAGTACACTGTAGCTGTCT
TCAGACACACCAGAAGAGGGCATCAGATCTCATTTCAGATGGTTGAGAGC
CACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCA
GTGAGCTGAGCCATCTCGCAAGTTTACCCCCTTTACTGTGAATGTTGACA
TGGCTGAATTTATTTCTCCCAAGTTGCTATTTGTTTTCTATTTGTTGCAC
CTGTTCTTTGTTTCTTTGGGTGTCCTTTTTCTACCTTATTTTTTGCAGTC
AGTTTGTTTAAATATTCTGGTTTTTTATTTTCAATTTGCTTTTTTAACTG
TAATACCCTTCCCTACACCCCCATTGATCTTTCTCTAGGTACTGCATACC
TTTTTAAATATGTATTTGTTGCTGTTTGTATATTTCATATATGCATATAA
TGT

Query= MSMg01no098_o01.g1 MSMg01no098_o01.g1 CHROMAT_FILE:
MSMg01no098_o01.g1 PHD_FILE: MSMg01no098_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:07 2005
         (618 letters)



>mm_chr8_111826286_111827303
          Length = 1018

 Score = 1187 bits (614), Expect = 0.0
 Identities = 617/618 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caatgactaatgtttttggtactgtgccttttcttgccctgtcttcagcaagtctttgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgactaatgtttttggtactgtgccttttcttgccctgtcttcagcaagtctttgtc 260

                                                                       
Query: 61  cttgcattcatgagtgccttttacaagcactatgcaattggggttttatactaattttcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgcattcatgagtgccttttacaagcactatgcaattggggttttatactaattttcg 320

                                                                       
Query: 121 tattttctctaccttttaagtatgaaggggttttttgtttgtttgtttgtttttgttttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttctctaccttttaagtatgaaggggttttttgtttgtttgtttgtttttgttttt 380

                                                                       
Query: 181 gttttaatgatttatttattttatgtatatgagtacactgtagctgtcttcagacacacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttttaatgatttatttattttatgtatatgagtacactgtagctgtcttcagacacacc 440

                                                                       
Query: 241 agaagagggcatcagatctcatttcagatggttgagagccaccatgtggttgctgggaat 300
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 agaagagggcatcagatctcatttcagatggtttagagccaccatgtggttgctgggaat 500

                                                                       
Query: 301 tgaactcaggacctctggaagagcagtcagtgagctgagccatctcgcaagtttaccccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaactcaggacctctggaagagcagtcagtgagctgagccatctcgcaagtttaccccc 560

                                                                       
Query: 361 tttactgtgaatgttgacatggctgaatttatttctcccaagttgctatttgttttctat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttactgtgaatgttgacatggctgaatttatttctcccaagttgctatttgttttctat 620

                                                                       
Query: 421 ttgttgcacctgttctttgtttctttgggtgtcctttttctaccttattttttgcagtca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgttgcacctgttctttgtttctttgggtgtcctttttctaccttattttttgcagtca 680

                                                                       
Query: 481 gtttgtttaaatattctggttttttattttcaatttgcttttttaactgtaatacccttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtttgtttaaatattctggttttttattttcaatttgcttttttaactgtaatacccttc 740

                                                                       
Query: 541 cctacacccccattgatctttctctaggtactgcatacctttttaaatatgtatttgttg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctacacccccattgatctttctctaggtactgcatacctttttaaatatgtatttgttg 800

                             
Query: 601 ctgtttgtatatttcata 618
           ||||||||||||||||||
Sbjct: 801 ctgtttgtatatttcata 818


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)