Query= MSMg01no099_o02.b1 MSMg01no099_o02.b1 CHROMAT_FILE:
MSMg01no099_o02.b1 PHD_FILE: MSMg01no099_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:33 2005
(520 letters)
>mm_chr8_59584268_59585187
Length = 920
Score = 719 bits (372), Expect = 0.0
Identities = 417/432 (96%)
Strand = Plus / Plus
Query: 7 gaattcatttttttacccgctgagtagtactccattgtgtacatgtaccacattttctgt 66
||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 207 gaattcatttttttaatagctgagtagtattccattgtgtaaatgtaccacattttctgt 266
Query: 67 atccattcctgtgttgaggggcatctgggttctttccagcttctggctattataaataag 126
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atccattcctctgttgaggggcatctgggttctttccagcttctggctattataaataag 326
Query: 127 gctgctatgaacatagtggagcatgtgtccttcttaccggttgggacatcttctggatat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gctgctatgaacatagtggagcatgtgtccttcttaccggttgggacatcttctggatat 386
Query: 187 atgcccaggagaggtgttgctagatcctccggtagtactatgtccaattttctgagtaac 246
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 387 atgcccaggagaggtgttgctagatcctctggtagtactatgtccaattttctgaggaac 446
Query: 247 cgccagactgatttccagagtgcttgtacaagcttgcaatcccaccaattccctcatctt 306
|||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 447 cgccagactgatttccagagtggttatacaagcttgcaattccaccaattccctcatctt 506
Query: 307 tctaaatacaaacttttattaagatccaacaatgcttcgctttccatgactcattaaacc 366
| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 507 tttaaatacaaacttttattaagatccaacaatgttttgctttccatgactcattaaacc 566
Query: 367 caccccacactgagatcctccttctctgcaggttcatgatacaataggacagaagtacag 426
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 567 caccccacactgagatcctccttctctgcaggttcatgatataataggacagaagtacag 626
Query: 427 aaaagagagaca 438
||||||||||||
Sbjct: 627 aaaagagagaca 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_o02.g1 MSMg01no099_o02.g1 CHROMAT_FILE:
MSMg01no099_o02.g1 PHD_FILE: MSMg01no099_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:33 2005
(374 letters)
>mm_chr8_59703200_59703971
Length = 772
Score = 658 bits (340), Expect = 0.0
Identities = 365/374 (97%), Gaps = 2/374 (0%)
Strand = Plus / Minus
Query: 1 attctttctttgcttttaaacttattttaaaaatcctctcagtaagaactcataattttc 60
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 572 attctttctttgcttttaaacttattttaaaaatcttttcagtaagaactcataattttc 513
Query: 61 aaccctttgtttctttctgtaactttctccttttgtcatttattatcttgcctatttcta 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 512 aaccctttgtttctttctgtaactttcttcttttgtcatttattatcttgcctatttcta 453
Query: 121 ctcattcttttcctcagttaagttaggtttatttatttgtttatggctgtctttaggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctcattcttttcctcagttaagttaggtttatttatttgtttatggctgtctttaggtca 393
Query: 181 tctctaaggacaggtatatatcagaaggcaaaaggacacctacacatctgatttctgctg 240
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tctctaaggacagg--tatatcagaaggcaaaaggacacctacacatctgatttctgctg 335
Query: 241 tcagcctgggaccattttttcctgtgatgttttggagaggacatggactagccttgtcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcagcctgggaccattttttcctgtgatgttttggagaggacatggactagccttgtcta 275
Query: 301 ctaacaaatattactttaaaagaaatatttaaaagaattttcttagtctgcctttttagt 360
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 274 ctaacaaatcttactttaaaagaaatatttaaaagaattttcttagtctgtctttttagg 215
Query: 361 actgccttgagggg 374
|||||||| |||||
Sbjct: 214 actgccttcagggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 772
Length adjustment: 9
Effective length of query: 365
Effective length of database: 763
Effective search space: 278495
Effective search space used: 278495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
