Query= MSMg01no099_p23.b1 MSMg01no099_p23.b1 CHROMAT_FILE:
MSMg01no099_p23.b1 PHD_FILE: MSMg01no099_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:43 2005
(413 letters)
>mm_chr8_84090675_84091487
Length = 813
Score = 710 bits (367), Expect = 0.0
Identities = 390/409 (95%), Gaps = 18/409 (4%)
Strand = Plus / Minus
Query: 23 cttataatgaaatgacaagagataaatacaagattcggaataaagtgacaattactttaa 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 cttataatgaaatgacaagagataaatacaagattcggaataaagtgacaattactttaa 750
Query: 83 aatccctctcctatcagatgttgacatcactaggcaagtgaaacaaattctcatacaaca 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aatccctctcctatcagatgttgacatcactaggcaagtgaaacaaattctcatacaaca 690
Query: 143 ttttgcaaatcacgtgagagacagac------------------agagagagagagagag 184
|||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 689 ttttgcaaatcaagtgagagacagacagagagagagagagagagagagagagagagagag 630
Query: 185 agagagagagagagagcgcatttatctttatactatgccatctagaataaaagttgtatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agagagagagagagagcgcatttatctttatactatgccatctagaataaaagttgtatt 570
Query: 245 ttaggcctcttacgctgaagttccagcccccgtgatagaagcctctgtgatagaactaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttaggcctcttacgctgaagttccagcccccgtgatagaagcctctgtgatagaactaga 510
Query: 305 aataacatgaaaggcacctggaaatttttctgaaccaaatctttggcctttttcccttta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aataacatgaaaggcacctggaaatttttctgaaccaaatctttggcctttttcccttta 450
Query: 365 ctttaccttctggctattgagaacattggctgaagatccaggcacttaa 413
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctttaccttctggctattgagaacattggctgaagatccaggcacttaa 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_p23.g1 MSMg01no099_p23.g1 CHROMAT_FILE:
MSMg01no099_p23.g1 PHD_FILE: MSMg01no099_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:43 2005
(249 letters)
>mm_chr8_83993248_83993896
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 tctgctacatatccagctggagacatgggtaccccctgcatactctttggttggtggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgctacatatccagctggagacatgggtaccccctgcatactctttggttggtggttt 260
Query: 61 agtccctaggaattttgggggggggctctggttggttgatgttgttgttcttcctatgag 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 agtccctaggaattttggggggggcctctggttggttgatgttgttgttcttcctatgag 320
Query: 121 gttttcatatgcagtttgcattcaaagccaaggatggtttctgtgagttataggaatttt 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 gttttcatatgcagtttgcattcaaagtcaaggatggtttctgtgagttataggaatttt 380
Query: 181 ataaaaacctctgggtaataagagtctaggaagaggcctgcctgatgcttgagtgaaacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaaaacctctgggtaataagagtctaggaagaggcctgcctgatgcttgagtgaaacg 440
Query: 241 tttcactaa 249
|||||||||
Sbjct: 441 tttcactaa 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
