Query= MSMg01no100_c16.b1 MSMg01no100_c16.b1 CHROMAT_FILE:
MSMg01no100_c16.b1 PHD_FILE: MSMg01no100_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:57 2005
(566 letters)
>mm_chr8_51275480_51276445
Length = 966
Score = 1048 bits (542), Expect = 0.0
Identities = 557/562 (99%)
Strand = Plus / Minus
Query: 5 gaattccatacttcaccatcgaacctttcatctaattaagcaactaagaccttcttcacc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaattccatacttcagcatcgaacctttcatctaattaagcaactaagaccttcttcacc 707
Query: 65 ttaccctctactttctctagcatgctggcaataccacagtccagcccaacagcttcacct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ttaccctctactttctctagcatgctggcaataccacagtccagcccaacagcttcacct 647
Query: 125 tgtccaaatagtctacccaagatacaagtctcatcatgtattcaacctggggcttattgt 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tgtccaagtagtctacccaagatacaagtctcatcatgtattcaacctggggcttattgt 587
Query: 185 taccatgagaaaaagcaagctgtgtggtttgatctgaagaagcagaccttgggtggctaa 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 586 taccatgagaaaaagcaagctgtgtggtttaatctgaagaagcagaccttgggtggctaa 527
Query: 245 actctggttcactccctccataccaagcccttgatccttcagccagatatttttactgga 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 526 actctggttcactccctccataccaagcccttgatccttcagccagataattttactgga 467
Query: 305 tcaacccagaatttcttagaattctttatacagcatggcaattcttatcatcgtgaaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcaacccagaatttcttagaattctttatacagcatggcaattcttatcatcgtgaaatt 407
Query: 365 atttcaacttgcttataaattagcagttttcccttttactcttgtcagatctgtaagttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atttcaacttgcttataaattagcagttttcccttttactcttgtcagatctgtaagttt 347
Query: 425 cacttcattcacccatcacttcccttgggatccttctgtaattctccaaggcgggattat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cacttcattcacccatcacttcccttgggatccttctgtaattctccaaggcgggattat 287
Query: 485 gcatgaaaatcctctgtatacctctgctagtacacttcccatgttgattatgcaaaatcg 544
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 286 gcatgaaaatcctctgtatacctctgctagtacacttcccatgttgtttatgcaaaatcg 227
Query: 545 gccccttctatttgcttctaga 566
||||||||||||||||||||||
Sbjct: 226 gccccttctatttgcttctaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no100_c16.g1 MSMg01no100_c16.g1 CHROMAT_FILE:
MSMg01no100_c16.g1 PHD_FILE: MSMg01no100_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:57 2005
(166 letters)
>mm_chr8_51106617_51107182
Length = 566
Score = 197 bits (102), Expect = 2e-55
Identities = 145/160 (90%), Gaps = 3/160 (1%)
Strand = Plus / Plus
Query: 8 tatctatatctatatcta-tatctatatctatatctatctattattctagaagaagccat 66
|||||||| ||||||| || ||||| ||||| ||| ||||||||||||| ||||||
Sbjct: 209 tatctata--aatatctagaatttatatatatatatataaattattctagaaggagccat 266
Query: 67 catcaaagaatctctaaaaattaataatccaattctagaaacattaatagctataatagc 126
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 267 catcaaagaatccctaaaaattaataatttaattctagaaacattaatagctataatagc 326
Query: 127 actactaaatttattcttctatacatgcttcatttattcc 166
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 actactaaatttattcttctatacatgcttcattttttcc 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
