NNNCCTTGATCTGNNNCGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCGCGGAATTCTTTATTTATCCCTGAGCCCCATTTTT
TAGTGGGGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATAT
ATACTTGATATTAGTCCCTTATCTGATTTAGGGTTGGTAAAGATCCTTTC
CCAATCTGTTGGTGGCCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTAC
AGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCAATTCTTGATCTTACA
GTACAAGCCATTGCTGTTCTATTCAGAAAATTTTCCCCTGTGCATATCTT
CAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTCACTGTCTCTGGTTTTA
TGTGAACTTCCTTGATCCATTTAGATTTGAACTTAGTACAAGGAGATAGG
AATGGATCAATTCACATTCTACTACATGATAACTGCCAGTTGTGCCAGCA
CCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCT
TGTCAAAGATCAAGTGACCATAGGTGTGTTGGTTCATTTCTGGGTCTTCA
ATTCTATTCCATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCAGT
TTTTACCACAATTGTTCTGTAGTACAGCTTTAGGTCAGGTATGGTGAATT
CTCCCAGAGGTTCTTTTATCATTGAAAA

GATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATCAATTTCAACTGTATATCCCTACCTCAG
TTTTCTGTTCTAGGGACATTCTTCCATAGTTCCTATTTCTTGAGAGTTAT
CAGAATGGGTTGCGACCTTATCAAGATGGGTTTCTTTTCTCTTGTCTCCA
GTTTTCAGTGGTGTGCTGAGCTATGTGTAATGTATGTGTGTAGGCAGCAT
AGATCACCCTCTATGCTGTGTAGATGTGTAGGCAGCATAGATCACCCTCT
ATGCTGTGTAGATGTGTAAGTAGTTTGCCACATGGGGAGACAGTTCATGG
TTAAATAGCTTGAGGCTTCTAGGATGTGTTGATGTTGTTGACAGTGGCAG
AATGCATGTCCATGGAGGGAAGCTTCAGGGTGAGGGGAGGAGATGAACTC
ATGAGATCTTGGGGATCTGACAGTAAGGAGGGTAATAGAGGTAAACCAGG
CCCTACCACTTTTAATCTTTAAAAGTGTGGAGGAAGTAAGGAGTTATCCA
GCTTTCAAAAGATTGCCTGTGTATATATGTTTGGTGTTTGTGTAGATGCG
TGTTCTTACATGGCTGGGTGCACATATGTGTGCCCATGCAGATAGAAGAC
TGAAGTTGAAGACAGATGAGTTCTTCAGTCCCCCTCACTATGTTTATTAA
GCCACGT

Query= MSMg01no102_o01.g1 MSMg01no102_o01.g1 CHROMAT_FILE:
MSMg01no102_o01.g1 PHD_FILE: MSMg01no102_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:36 2005
         (537 letters)



>mm_chr8_63176097_63177033
          Length = 937

 Score = 1031 bits (533), Expect = 0.0
 Identities = 536/537 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catcaatttcaactgtatatccctacctcagttttctgttctagggacattcttccatag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 catcaatttcaactgtatatccctacctcagttttctgttctagggacattcttccatag 678

                                                                       
Query: 61  ttcctatttcttgagagttatcagaatgggttgcgaccttatcaagatgggtttcttttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttcctatttcttgagagttatcagaatgggttgcgaccttatcaagatgggtttcttttc 618

                                                                       
Query: 121 tcttgtctccagttttcagtggtgtgctgagctatgtgtaatgtatgtgtgtaggcagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcttgtctccagttttcagtggtgtgctgagctatgtgtaatgtatgtgtgtaggcagca 558

                                                                       
Query: 181 tagatcaccctctatgctgtgtagatgtgtaggcagcatagatcaccctctatgctgtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tagatcaccctctatgctgtgtagatgtgtaggcagcatagatcaccctctatgctgtgt 498

                                                                       
Query: 241 agatgtgtaagtagtttgccacatggggagacagttcatggttaaatagcttgaggcttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agatgtgtaagtagtttgccacatggggagacagttcatggttaaatagcttgaggcttc 438

                                                                       
Query: 301 taggatgtgttgatgttgttgacagtggcagaatgcatgtccatggagggaagcttcagg 360
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 437 taggatgtgttgatgttgttgacagtggcaggatgcatgtccatggagggaagcttcagg 378

                                                                       
Query: 361 gtgaggggaggagatgaactcatgagatcttggggatctgacagtaaggagggtaataga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtgaggggaggagatgaactcatgagatcttggggatctgacagtaaggagggtaataga 318

                                                                       
Query: 421 ggtaaaccaggccctaccacttttaatctttaaaagtgtggaggaagtaaggagttatcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggtaaaccaggccctaccacttttaatctttaaaagtgtggaggaagtaaggagttatcc 258

                                                                    
Query: 481 agctttcaaaagattgcctgtgtatatatgtttggtgtttgtgtagatgcgtgttct 537
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agctttcaaaagattgcctgtgtatatatgtttggtgtttgtgtagatgcgtgttct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)