Query= MSMg01no102_o23.b1 MSMg01no102_o23.b1 CHROMAT_FILE:
MSMg01no102_o23.b1 PHD_FILE: MSMg01no102_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:40 2005
(234 letters)
>mm_chr8_101163871_101164504
Length = 634
Score = 445 bits (230), Expect = e-129
Identities = 233/234 (99%)
Strand = Plus / Plus
Query: 1 aaattctttgcatatacttaagttataaaataacaacaacaacaaaccctgaagccttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattctttgcatatacttaagttataaaataacaacaacaacaaaccctgaagccttga 260
Query: 61 ttgttgttttctttactgagaaaagtgaagtatcttttttatcccaattttgatgaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgttgttttctttactgagaaaagtgaagtatcttttttatcccaattttgatgaaatg 320
Query: 121 tattttgtttgatcatgctcttatttgggggacaaggacttaatatttttagcaaactgc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttgtttgagcatgctcttatttgggggacaaggacttaatatttttagcaaactgc 380
Query: 181 cctagacttatatgtaattgctttgtactgttgaattgatatactctgttcagg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctagacttatatgtaattgctttgtactgttgaattgatatactctgttcagg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_o23.g1 MSMg01no102_o23.g1 CHROMAT_FILE:
MSMg01no102_o23.g1 PHD_FILE: MSMg01no102_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:40 2005
(522 letters)
>mm_chr8_101318252_101319173
Length = 922
Score = 549 bits (284), Expect = e-160
Identities = 302/308 (98%), Gaps = 2/308 (0%)
Strand = Plus / Minus
Query: 1 tcttaaagatgtagtgccatggcatattcccataatcagagtgtgactatgcctatgccc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcttaaagatgtagtgccatggtatattcccataatcagagtgtgactatgcctatgccc 248
Query: 61 catatcctctgccattcaaaaaattcatgaagatcaatacttttctggatgggggaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 catatcctctgccattcaaaaaattcatgaagatcaatacttttctggatgggggaaaat 188
Query: 121 tcagagaaccacagccaaatatcaggtagatcacagggagtcttgtggaagagtgggagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcagagaaccacagccaaatatcaggtagatcacagggagtcttgtggaagagtgggagt 128
Query: 181 cagagataagcaaatcaggtg-tatcaatcacaccacaagaagacccacagtgtcagcta 239
||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||
Sbjct: 127 cagagataagcaaatcagg-gatatcaatcacaccacaagaagacccacagtgtcaacta 69
Query: 240 acctagaactcaggaatcacagggcctgggccaccattcagggagcatgaaagagctagg 299
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 68 acctagaactcgggaatcacagggcctgggccacgattcagggagcatgaaagagctagg 9
Query: 300 cctagacc 307
||||||||
Sbjct: 8 cctagacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
