BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-106J15.T7 (MSMg01no106_j15.b1) | MSMg01-106J15.TJ (MSMg01no106_j15.g1) |
ACC | AG320640 | AG320641 |
length | 1,367 | 1,367 |
length of high quality (start - end) | 314 (91 - 404) | 277 (134 - 410) |
definition | CHROMAT_FILE: MSMg01no106_j15.b1 PHD_FILE: MSMg01no106_j15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:07:17 2005 | CHROMAT_FILE: MSMg01no106_j15.g1 PHD_FILE: MSMg01no106_j15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:07:17 2005 |
singlet/doublet | doublet | doublet |
---|
BLAST hit | unique | unique |
---|
Map location. | (48,567,243 - 48,567,556) | (48,723,813 - 48,724,089) |
---|
sequence | CCCCCTTTNNTATCAATGGGCGCTAACACTCCTAAGGGAGAGGATCCGCG
GAATTCCAGAGAAGACCCTGACCCTTTAAGAGTTCTGGNGACCACGAAGG
ACCTCAAGATTACCCCCTGATATACTGTGCTGTAGTTACAGAAATTTGGG
GGCCCTTCCTTAGTCACCAGGGTGGAGGAGGCCAGGTGTGTTCACTAGTA
TCTCATAGCAGCCAGGAGGGAGACACAGAAGGGATGTAGTTCCAATAGCC
ACACCGATGGCACTGCCACAAGGGCCGACCCGACCTCTTAGGGGGTCAAA
CATTTCAGAGGACTTTCTAAATCTAAATCACAGCCACCTCTTAAGGCAGC
TTGGCAAAACCCCTGTAAGACATTTTGCAGCATTGCCTCACAAATGCAAG
AGTCTCTGATGCTTGCGGCAGCGTGTGAAAGGCGCATTCAAGTAGGTTGC
CATACCAACTTGGAAGTGGAAGCAGTGCCCGCAGGTTCCTGATGGATGGA
TGGCTTTCCCATGGGGTCCAGGACATGCCCTAGGGATGCTATTTCACCCC
ACCTCCTTCTGGTGTCCCTCACTCTCACCGAGTTCAGGCTTGGGCAGCAG
GTACCCATTCACCTGGCCTCTTCAGTTTCTGCAGCCACCTCCTGGCCCCC
AGCATGCAAGAGTACTAGAAAAACCTTCATGGTCTGTCACAGCGGGGTCC
CACTTTTACACCAAAAAGTTCATTGTTCTAAACTCACCCAGCCTGTCTGA
CCACTTTTTGAAATTTCATTATGCACCCATTTGAACTTTGTAACTCGGTC
ACTCCACACCCACCCTGTATTCCTGCATAGGTGAGACTCCACTGTTTTAT
TATTTTGGGCATGGGAACCGTGAACAGAATCAAACCTTCTTGTGGGGTAA
AAACACTTCTAGTTTTAATTTTTCAATGGATTGGAATGGTAATTCAAATG
GGGTAATAGGAAACTATCATTTTTTTACCTGGAAGAACTTGATTCCCCCC
CAAAAATTAAAACTTGTCATGCTCTGTTGTGATTTTTTCTTGTTTGCTTT
TTCTTTGTTGTTATAATGTTTCCCTTCCTTTGAATAAATGTAACATTAAT
TGGTTTTTTTATTGTTGTCAACTCTCTCCTCCCTATGTCCAATATTCCTG
GATCCCCGATTTTTCTTTATATTATTTCCTATATAACCTATCTCCGTGGC
CTATATTTTGGTTCCCCTCGGGTGGTGTCAAATATTAATACAAGATTCTT
GTNCTCCTTGTGGGCCTCTCCTTNGTTATATCTCTTCTCTCCCTCACTGC
CTGTGTATGTTATATAATATCAACAGATTATGTACGTCCTGATTTCTCTT
CTTCTTTAGTTACTTGG
| CCGTCCTTTTNTAATCACTGGAGGCTGGGGCGCCGGTXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCCTTTAGGGGGCGTACAAAGCAAG
TTCAATGGCTAAAAACTCCCCTTGGAGAACACTCAGACATCAGGCATCTA
TAGCCAAGCCCAGGTTGGTTAACATTAGCTAAGTAGTTATTGTCCGGTTT
GGGTCTTCCCATGATTCCTTGCTTCCATCAATAAGAGATACCGACACACT
CAGAACACCAGCTCCTTATGTTCTTCTAGCTGGGCTGCCTTGTCTGGCCT
CAGTGGGAGAGGAAGCACCTAGCCTCAAAGAGACATGAAGTACCAGGGTT
GGGGGATGCCAAGGGGGCCCCCGCCCGCTCTGAGGAGAAGAGGAGGGCTG
GAGGAGGGAAGGATTGTAGGAGGGAGTGACCAGGAGCGGGGAACAAAAAA
GGAAGATCAGTTTCTCTGCATACATTTCTAAGACTAGCCCTTTCTACTTT
GCTTAGAAAGATATTCTTGGGACAACTTTTTGTTTCCTCTTGCCTTCTCT
CTCCATGTATATCCAATTAATTTCGTCAATCTCTTCCTTTTCTTTCTTTC
TTTCTTGATCTCCTCCCTCCCTTCCTTCCATGCTCTCTTCCCTTTTTTTA
GACAGTGTCTCACCATGCATACCCGACTGGTCTGTATCTCTCTATGCTCT
TCTGGCTTTTCCTTCTGATTGTTGTGTCTGTACTCTTTCCCGCTTTTCTT
TTTTCTTATTGTCTTTGTCATATAATTGTTCTCTGTCCTCGTATGTCTCC
CTAACTACCAATCTGAAATGTTCTGGCTCTCTTACCTTGTGTCATCCTTG
TTTCTGTTGTCTTGATTTAATCTTCTGTCTTTTTTTTACTTTATTTACAT
TTTATTTTCTCTTATATCGTTTTTATCTATTCTCTCTTTTTTATCTTCTG
TATTGTTTATTACCTGTAACTGCTAATCTACCCTTAGATACTTTTCTTTT
TTGTCTCCATAAGTCTTTTTTGTTCTCTCTCTATTGTTATTCTATATTCC
CCTAATTTTATTCTATTGACTTTCTGGTTCCTATTATAATTAACATCCTT
GCTTCTCCTCTCTTTTATACTTTGGTTACATATTGTTTTCACTTTCCTTT
CTTTTATATGANTTATTTTATTTTCCTTTACTCTCTTTCATACTGTGGTC
ATAATTTGTATTCATTCTCTTCATTATACAATGCTGTTATTTTTTTGTTC
TCTCTCTACTTCTTCATTTGTATATATCTAGCTCTCTTTCTATACATCTT
ATCTCTTCATCTTCCTGTACAATCNTCTTCTATTCTCACTTCTCATCTCT
TTCTTCCTCTGTCATCT
|
quality values | Open.Hide. 9 9 9 9 9 9 10 3 0 0 3 7 8 8 9 9 10 10 12 11 12 13 13 8 8 8 8 10 15 8 8 8 8 8 8 12 22 29 28 28 24 29 29 30 30 32 42 43 43 42
34 32 28 24 26 18 15 15 31 31 43 43 41 41 39 33 33 24 24 16 15 9 12 9 9 9 9 6 6 7 6 9 10 11 14 16 17 3 0 3 21 21 33 30 33 33 33 33 33 37
33 36 36 36 33 33 39 50 33 33 33 37 25 20 18 10 10 10 17 14 22 22 29 29 28 29 28 33 36 30 38 31 31 28 25 25 37 42 53 48 57 43 59 46 46 43 43 44 57 43
43 43 43 43 46 46 54 54 41 30 30 19 25 28 40 44 43 47 47 47 42 46 37 37 37 43 43 44 44 48 57 47 47 43 36 32 28 28 28 28 42 42 44 42 39 46 37 37 37 37
57 57 57 47 50 50 43 43 43 43 43 43 43 43 38 38 38 43 43 52 52 52 52 52 43 43 35 35 35 43 43 59 57 57 59 59 43 35 35 43 43 43 35 35 43 43 57 57 43 42
39 35 35 42 43 57 57 57 57 39 39 33 43 43 43 43 43 43 52 52 52 43 43 31 31 29 43 39 39 39 43 43 52 57 59 52 57 43 44 42 42 43 42 35 35 38 50 43 52 52
52 52 52 57 50 57 52 52 37 50 50 54 54 57 57 57 43 43 28 28 29 44 44 57 57 43 43 43 43 42 43 43 42 42 32 32 25 36 36 59 44 57 48 48 48 48 48 48 48 44
44 36 28 28 30 30 39 37 36 37 39 39 43 59 59 44 42 37 37 37 39 39 43 59 59 59 37 37 35 39 39 34 40 37 32 39 37 37 43 43 43 43 43 43 59 39 35 35 30 30
22 30 21 28 18 21 13 18 18 18 11 11 12 25 23 39 39 35 39 39 43 43 48 39 39 32 32 30 30 30 37 32 30 30 32 42 34 40 25 25 25 40 40 43 46 46 47 47 48 39
39 35 35 39 47 39 37 35 35 41 41 20 20 20 32 32 37 37 37 43 44 44 23 23 23 44 36 44 47 47 42 42 37 37 37 44 47 57 57 57 57 57 57 57 48 48 44 44 37 39
43 47 37 39 37 59 43 43 43 37 37 35 43 43 32 33 35 43 43 43 28 28 28 43 43 52 52 52 52 43 44 38 35 32 37 33 43 37 37 43 52 52 57 57 50 43 35 32 35 31
35 35 35 44 43 43 43 50 50 43 37 32 28 31 32 43 32 32 32 32 25 27 27 44 44 54 46 46 39 39 35 31 31 42 42 43 40 40 43 44 42 30 24 15 12 12 16 16 11 12
12 21 28 42 46 43 43 43 43 35 35 35 39 42 39 43 40 40 43 48 48 40 39 35 35 35 47 59 47 37 33 30 28 28 32 34 39 34 36 32 28 22 23 14 16 16 14 21 18 27
22 16 16 10 10 10 10 10 19 11 15 15 19 23 17 20 12 11 11 21 16 13 16 10 10 13 25 22 23 12 6 6 6 6 10 15 15 15 11 11 10 10 11 17 17 19 21 14 28 26
20 16 16 11 11 11 21 22 12 12 10 8 8 8 10 10 10 10 10 12 22 22 27 27 10 10 9 15 15 24 21 15 22 13 10 10 10 10 15 9 9 9 11 12 19 23 34 25 33 33
37 28 28 28 28 34 27 16 12 10 10 10 10 8 10 8 9 9 10 23 16 16 16 13 10 10 13 13 16 23 34 27 23 15 14 14 16 17 19 11 12 8 10 6 6 6 10 10 10 10
10 11 12 16 9 9 9 13 13 10 12 11 11 15 16 16 12 9 9 9 8 10 10 10 10 10 10 8 8 8 8 8 8 10 10 10 9 8 8 8 8 15 13 12 9 10 8 10 10 15
13 10 9 9 13 13 8 8 8 11 11 15 13 13 10 10 9 10 10 13 13 10 8 8 8 8 6 6 7 6 8 8 10 10 10 12 15 12 12 12 12 9 9 9 10 10 13 13 15 26
19 14 9 8 8 8 8 8 8 8 8 8 8 10 13 15 17 24 24 27 19 13 6 6 6 6 8 8 8 8 8 9 9 9 12 12 10 10 8 8 8 8 10 10 10 10 8 8 8 12
11 15 12 8 8 8 6 6 6 6 8 10 9 9 9 8 8 8 9 10 10 10 15 15 10 11 11 9 9 9 9 10 12 10 10 8 8 6 6 8 8 10 10 11 11 11 15 18 16 12
12 12 11 8 8 8 6 8 8 8 8 8 8 9 7 10 10 8 8 8 8 9 9 12 11 12 10 10 10 10 9 9 9 15 15 9 10 10 10 10 8 8 8 11 9 9 10 10 17 11
10 8 7 7 10 8 8 10 8 8 8 8 10 9 8 12 9 10 15 10 15 11 11 11 9 9 9 9 10 8 10 10 10 8 8 9 9 8 8 8 8 8 7 6 8 8 10 11 11 11
8 6 6 6 10 10 34 19 16 8 8 8 8 8 9 8 10 7 9 10 8 8 6 6 8 6 9 8 10 6 7 8 10 10 10 12 11 10 12 8 9 9 10 9 9 13 12 12 10 8
8 8 8 8 8 8 6 6 6 6 13 11 11 10 10 10 14 10 9 9 9 8 8 6 6 8 8 8 6 6 6 8 8 8 8 6 6 10 8 8 8 8 8 8 8 6 6 8 8 8
10 10 7 7 10 10 23 18 8 8 8 8 8 10 10 6 6 6 6 8 8 13 7 9 12 8 8 8 8 8 8 8 11 11 10 8 8 6 6 6 6 8 6 6 6 8 8 6 6 9
8 3 0 3 10 12 15 10 10 10 8 8 8 10 8 10 8 10 10 9 10 9 3 0 3 10 13 13 9 8 8 8 6 8 8 8 8 6 6 7 6 8 8 8 8 10 10 13 8 8
6 6 8 8 8 8 8 9 10 8 8 8 6 6 8 8 19 8 8 8 6 6 6 6 9 9 9 10 11 13 11 9 6 6 6 6 8 8 8 6 6 6 6 7 6 7 7 7 7 9
7 7 6 7 6 8 8 6 6 6 8 8 8 8 8 8 8 | Open.Hide. 9 9 9 9 9 9 10 19 11 3 0 3 8 9 9 9 6 6 6 6 7 7 7 7 8 6 6 6 11 11 11 11 17 11 9 9 9 7 13 15 15 8 9 10 13 19 28 24 24 24
28 30 28 36 28 28 24 21 19 19 21 24 32 32 37 41 40 39 39 39 30 23 13 9 9 9 12 12 9 10 9 9 9 9 12 12 12 10 10 15 15 29 37 43 43 43 43 43 43 42
36 36 32 32 32 33 31 16 16 16 26 24 33 33 21 17 9 10 10 16 8 8 8 8 8 10 21 19 18 10 8 8 8 15 15 36 43 43 43 43 43 39 43 43 39 40 39 42 43 43
43 48 42 42 42 42 42 46 47 43 43 43 43 43 46 43 43 31 42 42 47 41 41 47 42 47 41 41 41 42 42 37 37 43 47 43 43 43 34 32 25 15 11 11 11 12 12 24 32 42
44 44 37 38 28 43 43 50 50 50 50 43 44 50 57 57 54 57 57 52 52 52 52 57 57 54 57 57 52 52 52 52 52 52 52 43 44 43 43 43 43 52 38 50 38 38 37 43 43 43
43 32 32 32 43 43 42 42 33 44 43 34 34 43 39 45 57 44 57 59 57 57 57 59 43 35 35 42 42 52 43 57 43 52 52 52 57 57 57 57 57 52 57 57 47 43 35 35 35 47
43 33 31 31 43 33 35 35 35 35 43 43 43 39 39 41 31 35 43 43 35 31 31 43 43 35 24 34 17 26 26 38 38 39 39 39 44 43 35 35 35 35 35 31 43 35 35 42 38 43
27 26 27 33 33 33 43 43 39 31 31 43 43 42 38 41 23 23 33 43 42 42 39 39 43 43 52 52 45 57 43 43 32 28 28 24 24 28 32 33 31 42 42 42 42 43 43 43 33 28
28 28 43 43 43 35 27 24 15 16 11 11 11 11 13 13 11 16 16 23 36 43 35 37 43 43 43 43 35 32 24 24 11 11 11 16 16 19 13 13 11 11 18 19 21 24 15 13 13 19
26 42 37 30 26 26 36 30 21 15 15 16 23 11 11 11 16 19 14 14 13 28 18 23 22 28 32 40 37 37 28 28 22 23 18 21 20 28 28 39 30 37 32 28 28 32 37 29 32 25
17 17 15 16 12 15 15 23 11 11 9 9 15 19 20 36 33 28 19 13 13 13 22 23 14 15 15 31 32 33 29 29 28 21 29 24 28 28 42 42 23 19 11 11 11 22 23 23 19 8
8 8 10 8 10 12 23 18 21 16 21 21 32 28 28 25 21 21 12 12 12 16 20 25 28 28 28 28 23 32 32 37 37 37 37 30 30 25 25 14 14 14 27 18 22 16 21 21 29 30
30 24 30 24 18 13 13 13 11 24 24 22 21 28 21 21 20 20 18 26 17 11 12 12 21 19 12 9 9 10 10 12 16 9 9 9 10 12 15 11 11 10 15 19 15 10 10 10 17 13
15 15 12 12 11 10 10 10 15 16 20 19 12 10 8 8 8 10 10 13 10 10 10 10 13 10 10 10 12 8 8 10 10 8 8 8 8 7 10 7 7 8 8 8 8 8 8 9 9 9
9 12 12 10 10 9 9 9 10 10 9 11 11 16 16 23 28 15 12 9 9 9 8 10 8 8 6 6 8 6 6 8 8 9 8 8 8 8 8 8 8 9 9 13 14 12 12 12 9 8
8 8 8 8 10 11 11 11 13 14 13 10 10 12 12 12 14 9 11 9 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 6 6 8 8 8 8 11 11 9
9 9 10 10 10 10 11 11 11 10 10 8 8 8 8 8 8 8 8 8 8 10 6 6 6 6 8 8 8 8 10 8 10 10 12 12 10 11 7 7 6 8 8 8 6 6 8 6 8 8
8 12 8 6 6 8 8 10 12 8 8 8 6 6 8 8 9 10 10 10 10 8 8 8 8 8 8 10 10 10 13 9 10 9 12 8 8 6 6 8 8 10 10 8 8 6 6 8 6 6
8 8 8 8 10 12 13 8 6 6 8 8 8 8 10 12 12 8 8 8 12 11 12 11 12 10 10 10 10 9 8 10 8 10 8 8 9 11 12 12 16 11 11 9 9 9 10 9 8 8
8 8 8 8 7 7 8 8 8 8 8 9 9 9 9 9 9 12 8 8 8 8 8 8 8 9 8 8 8 6 6 8 8 10 10 8 9 9 10 10 8 8 10 8 8 8 8 8 8 8
10 8 12 10 13 8 8 8 10 10 11 9 9 9 9 9 9 10 10 15 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8
10 9 9 9 10 13 13 10 8 8 8 8 9 9 10 10 9 9 9 9 9 9 9 9 8 8 8 12 10 10 10 10 10 8 8 6 6 8 6 6 10 8 8 8 8 8 8 8 8 8
8 10 9 8 8 8 7 10 6 6 6 6 8 8 9 11 10 10 11 9 9 9 10 9 9 8 8 8 8 8 8 8 10 9 9 9 10 10 12 11 11 11 12 12 8 8 8 8 10 10
10 8 8 8 12 10 8 6 6 8 3 0 3 6 6 8 8 10 10 7 9 15 15 15 12 9 7 13 8 8 8 8 8 8 8 9 14 11 8 8 8 8 8 8 6 8 8 8 8 6
6 8 8 8 10 11 11 11 11 11 13 16 13 12 11 9 8 8 7 6 8 8 8 8 8 8 8 8 8 8 8 6 9 7 8 7 9 9 9 9 10 13 9 11 8 8 8 8 8 8
10 12 11 11 10 10 8 8 8 8 10 10 11 11 8 9 9 10 8 8 8 8 6 6 6 8 10 10 8 8 8 8 6 6 6 9 10 10 11 13 8 8 8 8 8 8 8 8 8 6
6 8 7 7 7 13 8 8 6 6 6 6 6 6 8 6 7 6 6 6 6 8 8 3 0 3 9 8 8 8 8 8 11 14 12 13 8 8 6 6 8 8 8 8 9 8 8 8 8 9
12 7 8 8 8 10 9 9 12 6 6 6 6 6 8 11 7 |