Query= MSMg01no107_d07.b1 MSMg01no107_d07.b1 CHROMAT_FILE:
MSMg01no107_d07.b1 PHD_FILE: MSMg01no107_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:45 2005
(376 letters)
>mm_chr8_126745876_126746651
Length = 776
Score = 607 bits (314), Expect = e-178
Identities = 358/376 (95%), Gaps = 6/376 (1%)
Strand = Plus / Plus
Query: 1 atttctcattcacagcacaagtcgagaaatttcttggaaggcacagaaggtggtaaccat 60
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 201 atttctcattcacagcacaagtcgagaaatttctgggcaggcacagaaggtggtaaccat 260
Query: 61 catgccttgtgtcactaagagctgctaacagggagacattaaagtatcccccttatgagc 120
||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 261 catgccttgtgtcacgaagagctgctaacagggagacattaaaggatcttccttatgagc 320
Query: 121 tctggccacagcagctgctgggagcacagtaacacctgggaaggacattttaatatcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggccacagcagctgctgggagcacagtaacacctgggaaggacattttaatatcttg 380
Query: 181 acaaaagtctctgtgtaaacatggcttagattccatggggggagatttctgattgctcag 240
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 381 acaaaagtctctgtgtaaacatggcttagattccaaggggggagaattctgattgctcag 440
Query: 241 tgtcagtgctcgatatttttctggtcccagagcctagaaatgtggcctgggcagtcagtc 300
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 441 tgtcagtgctcgatatttttctggtcccagagcctagaaacgtggcctgggc------tc 494
Query: 301 tgaagacttgagctctacctctttacccaggggaaaagccaggtgtggtgacatgtcttt 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 495 tgaagacttgagctctacctcagcacccaggggaaaagccaggtgtggtgacatgtcttt 554
Query: 361 gaaatcacagcatggg 376
||||||||||||||||
Sbjct: 555 gaaatcacagcatggg 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_d07.g1 MSMg01no107_d07.g1 CHROMAT_FILE:
MSMg01no107_d07.g1 PHD_FILE: MSMg01no107_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:45 2005
(527 letters)
>mm_chr8_126909905_126910830
Length = 926
Score = 942 bits (487), Expect = 0.0
Identities = 518/531 (97%), Gaps = 8/531 (1%)
Strand = Plus / Minus
Query: 1 gtggcagcgcaggctatttacgtgtggctggggaaagtgaaggcggtggccgccctgctg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtggcagcg-aggctatttacgtgtggctggggaaagtgaaggcggtggccgccctgctg 493
Query: 61 tctaggcgaacagaaaacagaatttgctttgcaaagccctcagcgaggtgctttcctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tctaggcgaacagaaaacagaatttgctttgcaaagccctcagcgaggtgctttcctata 433
Query: 121 ggtgctgtcccagaaacagctgccgagccttgggctcgtctcctcataccagtgccgcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggtgctgtcccagaaacagctgccgagccttgggctcgtctcctcataccagtgccgcgc 373
Query: 181 tgggcatccggcatacgggcttgtccacctgactctgcagacagacttgaaaagttgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgggcatccggcatacgggcttgtccacctgactctgcagacagacttgaaaagttgatt 313
Query: 241 tcactcagtctgttctacaaggaaaacactagaaccgggt---atttccggccaatccag 297
||||||||||||||||||||||||||| ||||||||||| | |||||||||||||
Sbjct: 312 tcactcagtctgttctacaaggaaaacgctagaaccgggagcaa---ccggccaatccag 256
Query: 298 tgaattttaaggatatggtggctcagtggtgaaagcacctaccatgcaagcatgaggcct 357
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgaattttaaggagatggtggctcagtggtgaaagcacctaccatgcaagcatgaggcct 196
Query: 358 gcagctgagatccgtataggtgagctctgggcttgattgagaaaccctgcctcaatgaat 417
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggagctgagatccgtataggtgagctctgggcttgattgagaaaccctgcctcaatgaat 136
Query: 418 aagatggagctgagtggttgaagaagatgcccaatctcgaccttgggggtccatatccat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 aagatggagctgagtggttgaagaagatgcccaatctcgaccttgggggtccatatccat 76
Query: 478 gtgcacatgcacacatgtatgtgcacctcctacatgtacccccc-cacaca 527
||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 75 gtgtacatgcacacatgtatgtgcacctcctacatgtaccccccacacaca 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
