Query= MSMg01no108_n02.b1 MSMg01no108_n02.b1 CHROMAT_FILE:
MSMg01no108_n02.b1 PHD_FILE: MSMg01no108_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:48 2005
(217 letters)
>mm_chr8_93132759_93133375
Length = 617
Score = 383 bits (198), Expect = e-111
Identities = 210/214 (98%), Gaps = 2/214 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaag-attttcgtccatataatagcagatgcttgtatattattctacaattga 63
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcttaagaatttt-gtccatataatagcagatgcttgtatattattctacaattga 359
Query: 64 tcaataaatattaaacatccaccatatacctgacatcctcttggtgctaagtatgtgacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tcaataaatattaaacatccaccatatacctgacatcctcttggtgctaagtatgtgacc 299
Query: 124 ccaactctcttgaaaatatcctatagggatttaatgtattttcccaactatcaatattag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ccaactctcttgaaaatatcctatagggatttaatgtattttcccaactatcaatattag 239
Query: 184 gccttttttgctttttgttttttgtttcttatgt 217
| |||||||| |||||||||||||||||||||||
Sbjct: 238 gtcttttttgttttttgttttttgtttcttatgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no108_n02.g1 MSMg01no108_n02.g1 CHROMAT_FILE:
MSMg01no108_n02.g1 PHD_FILE: MSMg01no108_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:48 2005
(128 letters)
>mm_chr8_93031757_93032284
Length = 528
Score = 248 bits (128), Expect = 1e-70
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1 atcaggagacgtcattggctgccaattcctggctctgggttcaagccattgttcccagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcaggagacgtcattggctgccaattcctggctctgggttcaagccattgttcccagga 260
Query: 61 acccaacaaggacagccagtgctcttctggattccactgtttgcttctccacagttcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccaacaaggacagccagtgctcttctggattccactgtttgcttctccacagttcctt 320
Query: 121 gtctatcc 128
||||||||
Sbjct: 321 gtctatcc 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 528
Length adjustment: 8
Effective length of query: 120
Effective length of database: 520
Effective search space: 62400
Effective search space used: 62400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
