Query= MSMg01no109_k07.b1 MSMg01no109_k07.b1 CHROMAT_FILE:
MSMg01no109_k07.b1 PHD_FILE: MSMg01no109_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:56 2005
(251 letters)
>mm_chr8_84201016_84201667
Length = 652
Score = 468 bits (242), Expect = e-136
Identities = 248/250 (99%), Gaps = 1/250 (0%)
Strand = Plus / Plus
Query: 1 agaaaaca-agtgaggtttgtaacagtgacctctcagttttggcacctgtatctgttcga 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaaacacagtgaggtttgtaacagtgacctctcagttttggcacctgtatctgttcga 260
Query: 60 gtttcattttacttttgatgctgttgcaaataatctaacaaaagcaaggatttttgtttt 119
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gtttcattttacttttgatgctgttgcaaataatctaagaaaagcaaggatttttgtttt 320
Query: 120 tgtttgttttgataatttggactgaaattaattccaggttacagcccattattggtggaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttgttttgataatttggactgaaattaattccaggttacagcccattattggtggaa 380
Query: 180 atcaaggcaggagtttaagcatcctattcacactctatagtagataaagaataaataatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcaaggcaggagtttaagcatcctattcacactctatagtagataaagaataaataatc 440
Query: 240 ctgtctgttt 249
||||||||||
Sbjct: 441 ctgtctgttt 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 652
Length adjustment: 9
Effective length of query: 242
Effective length of database: 643
Effective search space: 155606
Effective search space used: 155606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no109_k07.g1 MSMg01no109_k07.g1 CHROMAT_FILE:
MSMg01no109_k07.g1 PHD_FILE: MSMg01no109_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:56 2005
(232 letters)
>mm_chr8_84280432_84281063
Length = 632
Score = 443 bits (229), Expect = e-129
Identities = 229/229 (100%)
Strand = Plus / Minus
Query: 1 tctgatggaagccggagtgctagcttgcgggcatggcagcttacagaagcactctgaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tctgatggaagccggagtgctagcttgcgggcatggcagcttacagaagcactctgaggt 370
Query: 61 ctgcttgtctgggcaggaagaagcaaaggaaacagccacttcctgggggatttctcatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctgcttgtctgggcaggaagaagcaaaggaaacagccacttcctgggggatttctcatcc 310
Query: 121 agcacactgagtcatgtgtatgcttcaaacaaataatgactaaggccatttctggatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agcacactgagtcatgtgtatgcttcaaacaaataatgactaaggccatttctggatgag 250
Query: 181 ttttctcaatctaagttgctatagaagggtttcaaggagaaactgtgcg 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttttctcaatctaagttgctatagaagggtttcaaggagaaactgtgcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
