Query= MSMg01no110_b12.b1 MSMg01no110_b12.b1 CHROMAT_FILE:
MSMg01no110_b12.b1 PHD_FILE: MSMg01no110_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:33 2005
(572 letters)
>mm_chr8_109894866_109895837
Length = 972
Score = 1067 bits (552), Expect = 0.0
Identities = 564/568 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtaacactgattccaagatatcctgagaactgtggttccataaagattattga 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtaacagtgattccaagatatcctgagaactgtggttccataaagattattga 264
Query: 65 actctggtgaagaactatgtttgagtaaatggatagatttcctggctataagagtacacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actctggtgaagaactatgtttgagtaaatggatagatttcctggctataagagtacacc 324
Query: 125 catgctgcctgttgcagtgatttgccaccaatgtgctttttgtttctaataacagtgatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgctgcctgttgcagtgatttgccaccaatgtgctttttgtttctaataacagtgatg 384
Query: 185 actgagagcctgttagattttccagctgacagcattgttgcttgtgtcctctgtttgtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actgagagcctgttagattttccagctgacagcattgttgcttgtgtcctctgtttgtaa 444
Query: 245 ctgcaaggctgggcctctcagttattattgctattaggaaatcatatttgtcatgtttac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgcaaggctgggcctctcagttattattgctattaggaaatcatatttgtcatgtttac 504
Query: 305 ttacattcttacttcctttcctgcattattttaatcaagtagtggcttaggacaacgtaa 364
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttatattcttacttcctttcctgcattattttaatcaagtagtggcttaggacaacgtaa 564
Query: 365 agcccagtagtgactaaggctgtgcttttgttgatgtaaaaaacgtggctgttggccaaa 424
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtccagtagtgactaaggctgtgcttttgttgatgtaaaaaacgtggctgttggccaaa 624
Query: 425 gtgaaggagttacttttagttttcatggagaagctgaaggagtaatttagctgtattagg 484
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgaaggagtttcttttagttttcatggagaagctgaaggagtaatttagctgtattagg 684
Query: 485 aactctgcagatctgaggactcctcctcacacacacaagcagatgacatgcctgcaaaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aactctgcagatctgaggactcctcctcacacacacaagcagatgacatgcctgcaaaac 744
Query: 545 tggttacagctgggaagttattgagttc 572
||||||||||||||||||||||||||||
Sbjct: 745 tggttacagctgggaagttattgagttc 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_b12.g1 MSMg01no110_b12.g1 CHROMAT_FILE:
MSMg01no110_b12.g1 PHD_FILE: MSMg01no110_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:33 2005
(621 letters)
>mm_chr8_109969709_109970733
Length = 1025
Score = 1011 bits (523), Expect = 0.0
Identities = 602/643 (93%), Gaps = 25/643 (3%)
Strand = Plus / Minus
Query: 4 gacagcctgagctacattgagagaccctgtcttgaaagaaaaaaaaaaaaa--------a 55
|||||||||||||||||||||| |||||||||||||| ||||||||||||| |
Sbjct: 872 gacagcctgagctacattgagataccctgtcttgaaaaaaaaaaaaaaaaaaaaaaaaga 813
Query: 56 caaattctctttagccaagattgatttcaaactttctatgtaaccttaaacttcagatcc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 caaattctctttagccaagattgatttcaaactttctatgtaaccttaaacttcagatcc 753
Query: 116 tcttgcctccatagataagacagacacacaccatcaaacctggtttgtgagaagctggag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tcttgcctccatagataagacagacacacaccatcaaacctggtttgtgagaagctggag 693
Query: 176 acagaacccagggctttctttgaacacattacgctccatccctcactccaaactcatcct 235
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 692 acagaacccagggctttctttgaacacactacgctccatccctcactccaaactcatcct 633
Query: 236 tttaaggcccataattgaagtgggtttttattagcattggagctgagctgtcatcaactc 295
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 632 tttaaggcccataattgaagtgggtttttattagcattggaactgagctgccatcaactc 573
Query: 296 cgattccagaccatttca----tcccaaacaagccctgtcaataccagcccacctcccct 351
|||||||||||||||||| ||||||| || || ||||||||||||||||||||| ||
Sbjct: 572 cgattccagaccatttcatcactcccaaataaaccttgtcaataccagcccacctccgct 513
Query: 352 cccccagctccaggcaaacatcagcctatttttgtcacggtagatttgcttactccagac 411
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 512 cccccagctccaggcaaacatcagcctatttttgtcatggtggatttgcttactccagac 453
Query: 412 aattcatacaaatgcagtcacgcgacctgtgagtagtcttgtaactgctttctttcatgg 471
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 452 aattcatacaaatgcagtcacgagacctgtgtgtagtcttgtaactgctttctttcatgg 393
Query: 472 aatgtttcaggtca-------------cttcccttttgtggctgaatgttgctccattga 518
|||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 392 aatgtttcaggtcactgtaacgtgtatcttcccttttgtggctaaatgttgctccattga 333
Query: 519 acagctctaccctctacttatccatttgtctgtcgtggacactgggctataaggaccggt 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acagctctaccctctacttatccatttgtctgtcgtggacactgggctataaggaccggt 273
Query: 579 tgattcactgttttctttccttgtttgtttaggttttttaata 621
||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 272 tgattcactattttccttccttgtttgtttaggttttttaata 230
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1025
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1015
Effective search space: 620165
Effective search space used: 620165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
