Query= MSMg01no111_g10.b1 MSMg01no111_g10.b1 CHROMAT_FILE:
MSMg01no111_g10.b1 PHD_FILE: MSMg01no111_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:40 2005
(487 letters)
>mm_chr8_80944902_80945788
Length = 887
Score = 938 bits (485), Expect = 0.0
Identities = 485/485 (100%)
Strand = Plus / Minus
Query: 1 gttttcttagaaggagaaagaatgggccctgacccagcatcatttgtgggataacttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gttttcttagaaggagaaagaatgggccctgacccagcatcatttgtgggataacttgat 626
Query: 61 attgtagtttctttcttcacagctccgcccctgtttagcacctagttctggagatatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attgtagtttctttcttcacagctccgcccctgtttagcacctagttctggagatatacc 566
Query: 121 tctttattccccactgagaaaactctaggcctggccacagagatgttgcccttgaatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctttattccccactgagaaaactctaggcctggccacagagatgttgcccttgaatcta 506
Query: 181 ttttgactgaggtacagcaaacccgcttaattatgtacatgttattacattatctatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttgactgaggtacagcaaacccgcttaattatgtacatgttattacattatctatcaa 446
Query: 241 aaatcccatcagaagagcataaaggccaataaattatctcagttattcatctaaaaatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatcccatcagaagagcataaaggccaataaattatctcagttattcatctaaaaatcc 386
Query: 301 atatattttgtcattttctttcaggaggagattatgttagtgtaacacaataaagaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atatattttgtcattttctttcaggaggagattatgttagtgtaacacaataaagaaaac 326
Query: 361 cattagcacagccagaaaattgcaactgagtgcaacaataattccactggcaagaataaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattagcacagccagaaaattgcaactgagtgcaacaataattccactggcaagaataaa 266
Query: 421 taacagttagagagagtggcgttcctgccttagattttcggggcgggggtgggagggtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taacagttagagagagtggcgttcctgccttagattttcggggcgggggtgggagggtgg 206
Query: 481 gggag 485
|||||
Sbjct: 205 gggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_g10.g1 MSMg01no111_g10.g1 CHROMAT_FILE:
MSMg01no111_g10.g1 PHD_FILE: MSMg01no111_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:40 2005
(664 letters)
>mm_chr8_80836778_80837841
Length = 1064
Score = 1243 bits (643), Expect = 0.0
Identities = 661/669 (98%), Gaps = 5/669 (0%)
Strand = Plus / Plus
Query: 1 ctggcctgcatgttggaatatgggacaggtatgga----cta-gcagttgctgggtatta 55
||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 196 ctggcctgcatgttggaatatgggacaggtatggaagagcaaagcagttgctgggtatta 255
Query: 56 tatctgtagctccaactattcaagaggccaaggcagggttgattgagcccagggtatggg 115
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 256 tatctgtagctccaactattcaagaggccaaggaagggttgattgagcccagggtatggg 315
Query: 116 gccagcttggaaatggagtaagattccatcttacaaaaagagagagagggagcatgagca 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gccagcttggaaatggagtaagattccatcttacaaaaagagagagagggagcatgagca 375
Query: 176 agagataggaggacactcaggttagtgttcacctgggagaccatatccatcacaatgaag 235
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 376 agagataggaggacactcaggttagtgttcacctgggagacaatatccatcacaatgaag 435
Query: 236 aagccacaggataactgggaacatgagagagtttcgctgtgcaagcccagctcatgccct 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aagccacaggataactgggaacatgagagagtttcgctgtgcaagcccagctcatgccct 495
Query: 296 ggagaaacctgcctcaggtcactgctgattcatgtagttacattgggccaaagtctgcac 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggagaaacctgcctcaggtcactgctgattcatgtagttacattgggccaaagtctgcac 555
Query: 356 taatgcatagatgctctcagtgttgaaaacaagtcaccattataagattttgtaagcttt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 taatgcatagatgctctcagtgttgaaaacaagtcaccattataagattttgtaagcttt 615
Query: 416 aaaataatgtcagggccaggatgacagtttttatggaaagaaagcaatgaactattttgg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaaataatgtcagggccaggatgacagtttttatggaaagaaagcaatgaactattttgg 675
Query: 476 gtataaaatattttaataattagctttcaatttaaggttttaaaatgtcacctaaaaata 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gtataaaatattttaataattagctttcaatttaaggttttaaaatgtcacctaaaaata 735
Query: 536 tgtggaccaaaataaagtcctacaaagtctcttcctaggtatttttatataccaactcaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgtggaccaaaataaagtcctacaaagtctcttcctaggtatttttatataccaactcaa 795
Query: 596 caaggtttcttacaaatttaaaaaattcagtggttccatctcatacctcagagcagcttc 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 caaggtttcttacaaatttaaaaaattcagtggttccatctcatacctcagagcagcttc 855
Query: 656 agtgagggc 664
|||||||||
Sbjct: 856 agtgagggc 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
