Query= MSMg01no114_g03.b1 MSMg01no114_g03.b1 CHROMAT_FILE:
MSMg01no114_g03.b1 PHD_FILE: MSMg01no114_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:03 2005
(644 letters)
>mm_chr8_80119730_80120773
Length = 1044
Score = 1228 bits (635), Expect = 0.0
Identities = 638/639 (99%)
Strand = Plus / Plus
Query: 6 gaattcaattaatttaaattttcagtccagaacattagattcatgcagtggtatgaagca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaattaatttaaattttcagtccagaacattagattcatgcagtggtatgaagca 265
Query: 66 ctgatttttttttttttttatgtttgtctgtttgataaattcaagagcattttgctaaag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctgatttttttttttttttatgtttgtctgtttgataaattcaagagcattttgctaaag 325
Query: 126 ttgttacttactttttgaatatatgatattccaaatgtttaagaaagtcaaagcctagga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttgttacttactttttgaatatatgatattccaaatgtttaagaaagtcaaagcctagga 385
Query: 186 aatttaaacattatttgtaatatgtaaaacatatacaaatatatgcatgttaacatgtgc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aatttaaacattatttgtaatatgtaaaacatatacaaatatatgcatgttaacatgtgc 445
Query: 246 gttattagtattatatgtggttttttctatctttgagattttgcaacattttgaactgca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gttattagtattatatgtggttttttctatctttgagattttgcaacattttgaactgca 505
Query: 306 cagagatcttgagctaacatgtcagctttaagggtccgtagataggtcagaagactcggt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cagagatcttgagctaacatgtcagctttaagggtccgtagataggtcagaagactcggt 565
Query: 366 agatgaatcagaagattcggtacataaatcagaagactcctgctgtgattccgaggtgtc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agatgaatcagaagattcggtacataaatcagaagactcctgctgtgattccgaggtgtc 625
Query: 426 aatcatgctattttcagatgtttctgttgaaggaaataaagcctgtaaagtaactatttg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aatcatgctattttcagatgtttctgttgaaggaaataaagcctgtaaagtaactatttg 685
Query: 486 ttcctggtcttgatattggctattatcaggaattgcgttctgttctgggatgtcaatcat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttcctggtcttgatattggctattatcaggaattgcgttctgttctgggatgtcaatcat 745
Query: 546 gacatctttgcgtttgtcaataagtttttgttgctcttctgggatgttaatcatgacatt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gacatctttgcgtttgtcaataagtttttgttgctcttctgggatgttaatcatgacatt 805
Query: 606 tttgcccgtatcattaagtttttgttgcttttctgtgat 644
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 806 tttgcctgtatcattaagtttttgttgcttttctgtgat 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_g03.g1 MSMg01no114_g03.g1 CHROMAT_FILE:
MSMg01no114_g03.g1 PHD_FILE: MSMg01no114_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:03 2005
(376 letters)
>mm_chr8_80223067_80223842
Length = 776
Score = 669 bits (346), Expect = 0.0
Identities = 368/376 (97%), Gaps = 3/376 (0%)
Strand = Plus / Minus
Query: 1 tcctattccaggttggatctgctgtattccatttttatggtttaaatacatgaccacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcctattccaggttggatctgctgtattccatttttatggtttaaatacatgaccacatc 426
Query: 61 tggcttcccaccaagaagtagttaaaggaaaaaagagaacattgatagctttttcataca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 425 tggcttcccaccaagaagtagttaaaggaaaaaagagaacattgatagctttttcatata 366
Query: 121 attatgactattccttggtatgtgactgtcattggcgatttttaaagattggctctgaca 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 365 attatgactattccttggtatgtgactgtcattggcgatgtttaaagattggctctgaca 306
Query: 181 ttacggcctgagaaactgctaattagctttccagacatgatgcactaaagatggatctgt 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 305 ttacggcctgagaaactgctaattagctttccagatatgatgcactaaagatggatctgt 246
Query: 241 agaagcacatggctttgtatcacctgccagtcggaaataaaaaaaaatgattcatataga 300
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 245 agaagcacatggctttgtatcacctgccagtcggaaagaaaaaaa--tgattcatataga 188
Query: 301 tcttctaaatgttggcctatcctgagatgtaatatcaaaaaatgcatccagcactaccat 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcttctaaatgttggcctatt-tgagatgtaatatcaaaaaatgcatccagcactaccat 129
Query: 361 ccccagtcttggccag 376
||||||||||||||||
Sbjct: 128 ccccagtcttggccag 113
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
