Query= MSMg01no114_o08.b1 MSMg01no114_o08.b1 CHROMAT_FILE:
MSMg01no114_o08.b1 PHD_FILE: MSMg01no114_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:42 2005
(306 letters)
>mm_chr8_9378196_9378900
Length = 705
Score = 551 bits (285), Expect = e-161
Identities = 297/301 (98%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaagtgcatttgttggaggtcctggcagacttcaggctctcgagttaggacatc 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 ggaattcaagtgcatttgttggaggtcctggcagacttcaggctctcgagttaggacacc 263
Query: 64 taggttaagcctgagaacctgtaagttccaggctggcaccttgtctagaggcctcatttg 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taggttaagcctgggaacctgtaagttccaggctggcaccttgtctagaggcctcatttg 323
Query: 124 atgaactatgctgtagaaggtctcaggctagtcctaggcctttattcttccattgttgat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgaactatgctgtagaaggtctcaggctagtcctaggcctttattcttccattgttgat 383
Query: 184 gatggaatttaaatgggatttgttgctagtgcttaacactgatgggtatcaacaaccata 243
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttggaatttaaatgggatttgttgctagtgcttaacactgatgggtatcaacaaccata 443
Query: 244 ccatcatcagatagttcaaattaaaagcctgtcagttccagttgttttattcccaacaga 303
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 c-atcatcagatagttcaaattaaaagcctgtcagttccagttgttttattcccaacaga 502
Query: 304 c 304
|
Sbjct: 503 c 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 705
Length adjustment: 9
Effective length of query: 297
Effective length of database: 696
Effective search space: 206712
Effective search space used: 206712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_o08.g1 MSMg01no114_o08.g1 CHROMAT_FILE:
MSMg01no114_o08.g1 PHD_FILE: MSMg01no114_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:42 2005
(401 letters)
>mm_chr5_8098390_8099190
Length = 801
Score = 702 bits (363), Expect = 0.0
Identities = 376/381 (98%), Gaps = 4/381 (1%)
Strand = Plus / Minus
Query: 1 tttctctgtgtttgcaataactacacatcactgtgatcaatgaggaacattgtaattaga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 380 tttctctgtgtttgcaataactacacatcactgtgatcagtgaggaacattgtaattaga 321
Query: 61 ctttatctctcccctctgttgtttccctttaaacaaagtcttttccccaacatccccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctttatctctcccctctgttgtttccctttaaacaaagtcttttccccaacatccccttt 261
Query: 121 atctctctttatccattttattttctgttcgtggattccccaccttttctctcccatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atctctctttatccattttattttctgttcgtggattccccaccttttctctcccatatc 201
Query: 181 tttcttgtttttttttcctttttctttctttttcttttttt-ttttt--ttacattcttc 237
||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 200 tttcttgtttttttt-cctttttctttctttttctttttttctttttgtttacattcttc 142
Query: 238 atatttcagtgatattcatcatctgtcaacatgacttggtataccttatatgatatttct 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atatttcagtgatattcatcatctgtcaacatgacttggtataccttatatgatatttct 82
Query: 298 caaaacaagagagtaaattcctataagagacagctcagacactaacaagggaatgaagaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 caaaacaagagagtaaattcctataagagacagctcagacactaacaagggaatgaagaa 22
Query: 358 atgtctccttcacactgagat 378
|||||||||||||||||||||
Sbjct: 21 atgtctccttcacactgagat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
